Thermotoga maritima Tma100: THMB_1263
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Entry
THMB_1263 CDS
T03900
Name
(GenBank) ATPase AAA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tmq
Thermotoga maritima Tma100
Pathway
tmq03420
Nucleotide excision repair
tmq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tmq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THMB_1263
03430 Mismatch repair
THMB_1263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmq03400
]
THMB_1263
Enzymes [BR:
tmq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THMB_1263
DNA repair and recombination proteins [BR:
tmq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THMB_1263
MMR (mismatch excision repair)
Other MMR factors
THMB_1263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_11
AAA_30
DEAD
ResIII
mTERF
TcdB_N
HEPN
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AKE30885
LinkDB
All DBs
Position
complement(1264790..1266736)
Genome browser
AA seq
648 aa
AA seq
DB search
MKEYRIRPREANLSFLEDLDEEQRRAVVESEGRCIVIAGPGSGKTRVITYKIAYLLANGV
DPSRILLVTFTRAAAREMVERAKAVTGRELSEMLAGTFHHVCNHFLRKYAPYVGLERNYS
ILDREDAESLMRHARSKYLERKSKEERKNFPQPSVLMAIYSYMKNTLKSLRESIVVKNPK
FLDLKEEISEIFDLYEQEKRSQNVVDYEDLLFYAYRLFEENKEIRDREAERFLWILVDEF
QDTNYVQYKIVEHLSSKHGNILAVGDDAQSIYSFRGARYENVEDFIRVPGTKIFKIQTNY
RSTESIVKFINAMLPRKSVPKELKPVKKDGMKPVVVKTWDRYEEARFVSQRILELIEEGF
KPEEIAVLYRSHSHSLELQMELVRSRIDFRVLSGPRFTESAHVKDVLSFLRIVQNPRDKS
AWLRAAKLFYGIGDRTASKIADLASAYVEEGLDPFQELKKVSFSGEYSRFIDILDQIRKL
DSPGEMIERVLSSFYSEYLEARYPDFREREMDLERLVEIASRYTSLESFLTDLAVTENVE
IEREISQKEGKVTLTTVHQAKGLEWRVVFVISVNPGDFPNYFAISEGNLDEEERIFYVAI
TRAKEQLYISYQVTGTSYPYRGNRFIMRSGENFIDRIPLELVEFWEVK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaataccggataagacccagggaagcgaatctttcttttctggaagatctggat
gaggaacagagaagagcagtcgttgaatcagagggaagatgcatcgtaatagcaggcccg
gggtctgggaaaacccgggttatcacgtacaagatcgcctatcttctggcgaacggtgtg
gatccttccaggattcttctggtcacgttcaccagagcagcggcgcgggaaatggtggag
agggcaaaggcggtgaccggaagagagctttctgagatgctcgccggaacgttccatcat
gtgtgcaaccacttcttgagaaagtacgcaccttacgtgggtttggaacgaaattactct
atcctagacagagaagacgcggagagcctcatgaggcatgcaagaagcaagtacctcgaa
agaaagagtaaagaagagagaaaaaactttccccagccctctgttttgatggctatatat
tcttacatgaaaaatactctcaaatctttgagggaaagtatcgtagtgaagaatccaaag
tttctggacttgaaggaagaaatctcggagatcttcgatctctacgagcaggaaaaacgc
tctcagaacgtggtggactacgaagaccttctcttctacgcttacagactcttcgaagag
aacaaagaaataagagatcgagaggcggaaagattcctttggatactcgtggatgagttc
caagacaccaactacgttcagtacaagatagtggaacacctctcgtcgaaacacggcaac
atcctggcggttggagacgacgcccagagtatttactcctttcgaggggcaagatacgaa
aacgtcgaggatttcataagagttcccggaacgaagatcttcaagatccagacgaactac
agaagcacggaaagtattgtgaaattcataaacgccatgctcccgagaaaatccgttcca
aaagaactgaagccggtaaagaaagatggcatgaaacccgttgttgtcaagacctgggat
agatatgaagaagcgaggttcgtgtctcagaggattctcgagttaatagaagaagggttc
aaaccagaagaaatcgccgttctctacagatcacattcgcactctctggaacttcagatg
gaactcgttcgaagtagaatagatttccgtgtgctgtctggtcccagattcaccgagagc
gcccacgtgaaggacgttctttcttttctcagaatcgttcaaaatccgagagacaaatcc
gcctggttgagggctgcaaaactcttctacgggatcggtgacagaacggcttcgaagata
gcggatctcgccagcgcttacgtggaagaaggtctggatcccttccaggaactgaagaaa
gtgagtttcagtggtgagtacagcaggtttatcgatattctcgatcagatcagaaagctc
gattctcctggggaaatgatagagcgcgtcctgtcttctttttattccgaatatctggaa
gcgaggtatcctgatttccgtgaaagggagatggatctggaaaggctcgttgaaatagcg
tctcgctacacaagtctcgaatccttcctgacggatcttgctgtgacggaaaacgttgaa
atagaaagagaaatctctcaaaaagagggaaaggtcactctcaccaccgttcatcaggca
aaagggctcgagtggagagtcgtttttgtcatctctgtgaatcccggagactttccgaat
tatttcgcgatatccgaagggaatctcgatgaggaagagaggatcttctacgttgccata
acaagagcaaaggaacagctgtatatttcctaccaggtcaccggaacctcctacccatac
cgcggaaacaggttcatcatgagaagcggagagaatttcattgacagaataccgcttgaa
ctcgtcgagttttgggaagtgaaatga
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