Thermotoga maritima Tma100: THMB_1677
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Entry
THMB_1677 CDS
T03900
Name
(GenBank) DNA repair protein Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tmq
Thermotoga maritima Tma100
Brite
KEGG Orthology (KO) [BR:
tmq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmq03400
]
THMB_1677
DNA repair and recombination proteins [BR:
tmq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THMB_1677
Archaeal homologous recombinant proteins
THMB_1677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
SbcC_Walker_B
AAA_27
AAA_29
AAA_21
ATG17_like
Seryl_tRNA_N
ABC_tran
Syntaxin
OVT1
DUF6364
RsgA_GTPase
BRE1
Motif
Other DBs
NCBI-ProteinID:
AKE31265
LinkDB
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Position
1623577..1626135
Genome browser
AA seq
852 aa
AA seq
DB search
MRPERLTVRNFLGLKNVDIEFQSGITVVEGPNGAGKSSLFEAISFALFGNGIRYPNSYDY
VNRNAVDGTARLVFQFERGGKRYEIIREINALQRKHNAKLSEILENGKKAAIAAKPTSVK
QEVEKILGIEHRTFIRTVFLPQGEIDKLLISPPSEITEIISDVFQSKETLEKLEKLLKEK
MKKLENEISSLQALYTAIWKYLEENDLEVLKSELKTVSEKKKELLKKREELQKEEEQLKR
LLEKYRELVKKKERLRVLSLRRNELQKEVIYEQKVKKAKELEPLFREIYLRQREFERFSQ
ELNSREKRYKELESEKEAISKEIPVHRERLSKLEEIGEKIKEELDLLEKVLKASRPLLEQ
RIRLKENLTRLEEEFRRLVGEKEKREKELLSIEKTENETKNELEKLLDELSILKKDHMKW
LAYQIASSLNEGDTCPVCGGVFHGKVEAVEFNIDEFEKLDQKRSELENTLNVLKERKKSL
SSLIEDLLMKIEEGKKNLKSIRNQIEKIEEELHRLGYSEDLEEKLDEKRKKLRKIEEERH
SISQKITAADVQISQIENQLKEIKGEIEAKRETLKEQREEMDQLKSDFFDRLRKIGIGFE
EFRILVKEEVKDAEKELGVVETEIRLLEESLKELESENVRDVSEDYEKVRNQLEALSQEI
SDLERKEGRLNHLIEETLRRERELKSLEKKLKEMSDEYNNLDLLRKYLFDKSNFSRYFTG
RVLEAVLKRTKAYLDILTNGRFDIDFDDEKGGFIIKDWGIERPARGLSGGERALISISLA
MSLAEVASGRLDAFFIDEGFSSLDTENKEKIASVLKELERLNKVIVFITHDREFSEAFDR
KLRITGGVVVNE
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcctgaaagactcaccgttagaaactttctcggactgaaaaacgtcgatatagag
ttccagagcggaataacggttgtagagggtcctaacggtgcagggaagtcgtccctcttc
gaagccatttctttcgcacttttcgggaacgggataaggtatcccaactcgtacgattac
gtgaacaggaacgccgtcgatggaactgcccgtctcgtgtttcaattcgaacgtggaggg
aaaagatacgaaatcataagagagataaatgccctgcagagaaaacacaacgcgaagctc
tccgagatactggaaaacggaaagaaagcggccatagctgcaaaacctaccagtgttaag
caggaagtggaaaaaattctgggaatagaacacagaaccttcataagaacggttttcctc
ccacagggggaaatagacaagcttttgatttctcctccatcggagatcaccgagatcatc
tccgatgttttccaaagcaaagaaacactcgaaaagctggaaaaactcctcaaagagaaa
atgaaaaagctggagaacgagatatcctcattgcaagctctctacaccgctatctggaaa
tatctggaagagaacgatctggaagttctgaagagcgagctgaaaaccgtctcggagaaa
aagaaagaacttctcaaaaaaagagaagaactccagaaagaagaagagcagctcaagagg
cttcttgaaaaatatcgggaactcgtgaaaaagaaagagaggctcagggtgctttctctg
agaaggaacgaattgcaaaaagaagtgatctacgaacagaaggtgaaaaaagcgaaagaa
ctggagccgctctttcgagaaatctatctcaggcagagggaatttgagaggttctcacag
gagctgaacagcagggaaaagagatacaaagaactcgaaagtgagaaggaagcgatctca
aaagaaatccctgttcacagggaaagactttccaagctggaggagataggagagaagatc
aaagaagagctggatcttcttgaaaaggtcttgaaggcctctcggccgcttcttgagcaa
agaataagattgaaagaaaatctcacgaggctcgaggaagagttcagaagactcgttgga
gaaaaagaaaagagggaaaaagaactgctttctattgaaaagacagagaatgaaacgaag
aatgagctggaaaaactactcgatgaactttcgattttgaagaaagaccacatgaaatgg
ctggcctatcagatagcttccagtctgaacgaaggtgatacttgtcctgtatgcggtgga
gtgttccatggaaaagtggaagccgtcgaattcaacatcgatgaattcgagaagctcgat
caaaaaagaagcgaactggaaaacaccttgaacgttctgaaagagagaaagaaaagcctt
tccagcctcatagaggatcttctgatgaaaatcgaagaggggaagaaaaatctgaagagc
attcgaaatcagatcgaaaaaatcgaagaagaactgcacagattgggttattcggaagat
ctggaggaaaaactggatgaaaaaagaaaaaagctcagaaaaatagaagaagagaggcat
tctatttcccaaaagatcacagcggccgacgttcagatttcacagatcgaaaaccagctg
aaagaaataaaaggagagatcgaagccaaaagggaaactctgaaagaacagcgcgaagag
atggaccagttgaaaagtgatttcttcgatcgtttaaggaagatagggatcggcttcgaa
gagttcaggatcctcgtcaaagaggaagtaaaggacgcggaaaaagaattgggagttgta
gagacggagatcaggcttcttgaggaaagcctgaaggagctcgaatcagagaatgttcga
gatgtgagtgaagattacgaaaaggttcgaaatcaactggaagctctctcacaggaaata
tcggatcttgagagaaaagaaggacggctcaatcatctcatcgaagaaacactcagaaga
gagcgagagttgaagagtctggagaagaaactaaaagagatgagcgatgaatacaacaat
ctggatcttctgaggaaatatctgttcgataaaagcaacttctcgagatacttcacaggg
agagttctcgaagcggtcctgaaaagaacgaaggcatatctcgacattctgacgaacgga
aggttcgacatagattttgacgacgaaaaaggtggttttatcataaaagattggggtatc
gaaagaccagcgaggggactttccggtggggaaagagctctcatttccatatctcttgcc
atgtcccttgcggaggtggcctccggcagactggacgcgttcttcatcgatgaagggttt
tccagtctcgacacggagaacaaagagaagatcgcttccgttttgaaggaactcgaaaga
ttgaacaaggtgatcgttttcatcacgcacgacagggagttctcggaggctttcgacagg
aagctgagaataacgggaggagttgtggtgaatgagtga
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