Thermaerobacter marianensis: Tmar_0103
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Entry
Tmar_0103 CDS
T01388
Name
(GenBank) bacterial nucleoid protein Hbs
KO
K03530
DNA-binding protein HU-beta
Organism
tmr
Thermaerobacter marianensis
Brite
KEGG Orthology (KO) [BR:
tmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmr03032
]
Tmar_0103
03036 Chromosome and associated proteins [BR:
tmr03036
]
Tmar_0103
03400 DNA repair and recombination proteins [BR:
tmr03400
]
Tmar_0103
DNA replication proteins [BR:
tmr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Tmar_0103
Chromosome and associated proteins [BR:
tmr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Tmar_0103
DNA repair and recombination proteins [BR:
tmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Tmar_0103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
DUF6262
HTH_78
Motif
Other DBs
NCBI-ProteinID:
ADU50228
UniProt:
E6SL26
LinkDB
All DBs
Position
105994..106266
Genome browser
AA seq
90 aa
AA seq
DB search
MNKPELVNAIAEKTGLNRKDSEKAVNAFVESISEALAKGEKVSLVGFGTFEVRTRQARTG
RNPRTGQTLTIPAAKVPAFKPGKQLREVVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagcccgagctggtcaacgccattgctgagaagacgggtttgaacaggaaggac
agcgagaaggcggtcaatgccttcgtggagtccatcagcgaggccctggccaagggcgag
aaggtctcgctggtgggcttcggcacctttgaggtgcgcacgcggcaggcccgcaccggc
cgcaacccgcggacggggcagacgctgacgatccccgctgccaaggtgccggccttcaag
cccggaaagcagctgcgcgaagtggtgaagtga
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