Thermaerobacter marianensis: Tmar_0285
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Entry
Tmar_0285 CDS
T01388
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tmr
Thermaerobacter marianensis
Pathway
tmr03420
Nucleotide excision repair
tmr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tmar_0285
03430 Mismatch repair
Tmar_0285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmr03400
]
Tmar_0285
Enzymes [BR:
tmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tmar_0285
DNA repair and recombination proteins [BR:
tmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tmar_0285
MMR (mismatch excision repair)
Other MMR factors
Tmar_0285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADU50410
UniProt:
E6SMF0
LinkDB
All DBs
Position
329983..332358
Genome browser
AA seq
791 aa
AA seq
DB search
MADLLADLNPAQREAVTHPGGPVLVLAGAGSGKTRVLTRRVAFLLEQGVAPHQILAITFT
NKAAREMRERVEQLVGTGARDMWIGTFHASCVRILRRDGYRIGYDRNFIILDEDDRRSVL
RDVLKERNLSETRYPPNAVGGMISAAKNQLLDPEEFAARHRDFYRQQVAAVYAAYQERLQ
RNGAMDFDDLLMQAVRLLEEAPDVLAYYQRRFVHILVDEYQDTNHAQYRLLRLLAAGHRN
LFVVGDPDQSVYRWRGADITNILRFEEDYPDARVVRLELNYRSTASILGAAQAVIEHNTQ
RKEKQLRSVHGEGARVVVFGAADEHDEAWFVAREMERLHGEEGYGYGEMAVLYRTHAQSR
VLEETLLRRGIPYRIVGGLKFYERKEVKDILAYLRLAVNPDDRISLRRVINVPRRGIGEA
TLARLEAYLDREGVGLLDALARAEDIPGVTRPQAAALMAFGGVIADLRAMAEQRPAYDVI
ALALDRTGYKEMLEQEQTPDAMSRLENLKELLSVARDFERQRGAGDAPLVDFLAEVALVS
DVDQLDEGARAVSLMTLHSAKGLEFDVVFITGMEEGVFPHSRSLDDPHELEEERRLCYVG
MTRARRRLYMCFTRQRTLFGATRRQVPSRFLEEADQRYLEWQGLPPGSDEPAFGDGGDAW
EAGAPAWRGAGARWGAAGRPGRGSGAFGWDRGRGGPGGGAGLDGRARGGPAWNGRGASET
AGATLRGDGTCGPAAAGGEPFRPGERVVHPRFGEGTIVMRRGEGDDAEVTIAFPDAGLKT
FIVRYANLRRA
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
gtggcggacttgctggcggatctcaacccggcccagcgggaggcggtcacccatcccggc
ggtccggtgctggtgctggccggcgccggcagcggcaagacgcgggtgctgacgcgccgg
gtggccttcctgctggagcagggggtggcgccccaccagatcctggccatcaccttcacc
aacaaggcggcccgggagatgcgggagcgggtggagcagctggtggggaccggcgcccgg
gacatgtggatcggcaccttccacgccagctgcgtccgcatcctgcgccgggacggctac
cggatcggctacgaccggaacttcatcatcctggacgaggacgaccgccggtcggtgctg
cgggacgtgctcaaggagcgcaacctcagcgagacccggtacccgcccaacgccgtgggc
ggcatgatctccgccgccaagaaccagctgctggaccccgaggagttcgccgcccggcac
cgggacttctaccgccagcaggtggccgccgtgtacgccgcctaccaggagcggctgcag
cgcaacggcgccatggacttcgacgacctgctgatgcaggccgtgcgcctgctggaagag
gcgcccgacgtgctggcctactatcagcgccggttcgtccatatcctggtggacgagtac
caggacaccaaccatgcccagtaccggctgctgcggctgctggcggcgggacaccgcaac
ctgttcgtggtgggcgacccggaccagagcgtctaccgctggcgcggcgcggacatcacc
aacatcctgcgctttgaggaagactatcccgacgcccgggtggtgcgcctggagctgaac
taccgctcgacggcgtccatcctgggcgccgcccaggcggtgatcgagcacaacacccag
cgcaaggagaagcagctgcgctccgtccacggcgagggggcgcgcgtggtggtgttcggg
gccgccgacgagcacgacgaggcctggttcgtcgcccgggagatggaacgcctgcacggc
gaggaaggatacggttacggggagatggcggtcctctaccgcacccatgcccagtcccgg
gtgctggaggaaaccctgctgcgccgcggcatcccctaccgcatcgtgggtggcctgaag
ttctacgagcgcaaggaggtcaaggacatcctggcctaccttcgcctggcggtgaacccc
gacgaccgcatcagtctgcggcgggtgatcaacgtgccgcggcgcggcatcggcgaggcc
accctggcccggctggaggcgtacctggaccgcgagggcgtcggcctgctggacgccctg
gcacgggcggaggacatccccggcgtcacccggccccaggcggcggcgctcatggccttc
ggcggggtcatcgccgacctgcgggccatggcggagcagcggccggcctacgacgtcatc
gccctggccctggaccgcaccgggtacaaggagatgctggagcaggagcagacgcccgac
gccatgagccggctggagaacctcaaggagctgctctccgtggctcgcgatttcgagcgc
cagcggggggcgggggacgcgccgctggtcgacttcctggcggaggtggcgctggtcagc
gacgtggaccagctggacgagggggcccgcgccgtctccctgatgaccctgcacagcgcc
aaggggctggagttcgacgtggtcttcatcacggggatggaggagggggtcttcccccac
agccggtccctggacgacccccacgagctggaggaggagcgccgcctttgctacgtgggg
atgacccgggcgcggcggcggctgtacatgtgcttcacccgccagcgcaccctgttcggc
gccacccggcggcaggtgccctcccgcttcctggaggaggccgaccagcggtacctggag
tggcaggggttgccccccggctcggacgaaccggccttcggcgacggcggggacgcctgg
gaggcgggtgcacccgcctggcgcggtgccggggcccggtggggtgcggcgggccggccg
ggccgcgggagcggggcgttcggctgggaccgcggccgcggcggtccgggtggaggagcc
ggcctggacggacgggcccgcggcgggccggcctggaacgggcggggtgccagcgagacg
gctggggcgacgctccgcggcgacggcacctgcggccccgcggccgcgggcggggaaccc
ttccggccgggggagcgggtggtccacccgcgcttcggcgagggcaccatcgtcatgcgc
cggggcgagggcgacgacgccgaggtgaccatcgccttcccggatgccggcctgaagacg
ttcatcgtccgttatgccaacctgcggcgggcgtga
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