KEGG   Thermaerobacter marianensis: Tmar_0422
Entry
Tmar_0422         CDS       T01388                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
tmr  Thermaerobacter marianensis
Pathway
tmr03030  DNA replication
tmr03410  Base excision repair
tmr03420  Nucleotide excision repair
tmr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tmr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Tmar_0422
   03410 Base excision repair
    Tmar_0422
   03420 Nucleotide excision repair
    Tmar_0422
   03440 Homologous recombination
    Tmar_0422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tmr03032]
    Tmar_0422
   03400 DNA repair and recombination proteins [BR:tmr03400]
    Tmar_0422
Enzymes [BR:tmr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Tmar_0422
DNA replication proteins [BR:tmr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Tmar_0422
DNA repair and recombination proteins [BR:tmr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Tmar_0422
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Tmar_0422
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 HHH_2
Other DBs
NCBI-ProteinID: ADU50543
UniProt: E6SGJ7
LinkDB
Position
494931..498113
AA seq 1060 aa
MCPSSARPDTKLVLIDGHSLMYRAFFALPPLATADGVPTNAVYGFLTMLLRLLEEVAPQY
IGVAFDRGLPAFRVERFPAYKGHRPEQPDELRPQFPLVKDVLAAMGVATVEHEGFEADDL
LGTLAHRARAAGVDRVLLVTGDRDVLQLVGDGVEVLLTRKGISDLQRYDEARIREEMGIA
PAQFLDVKALMGDPSDNIPGVPGIGEKTALKLIQQFGDLETVLARPEAAGGKKLPGLLRQ
YADQARLSRELARIRTDAPVEFDPERFARRPPDPAVLRPLLLRLEFRSLVDRLGLQAGRS
TAGTRASGETGPGDGQDPNREGQAVERGERHRRPAAPAPPVPAPEAAEAAGAGAEPEWPP
VDTLPDPAAVARWLEERVAGPQGGAVATREGPPADAVRGSRQGAGAGQPEAPPAEDGPAG
EPVTVVAVLAPAPSGPPSRAEAGDDPPTSATSGAAGGGPQLGGIGLAAAGRAAAWVAAGA
TGGGGATPGPDQSAGADHRTLAAALLRRSLAGFDLKPLYRWLLRSQEAEAGRPRSPAESA
GRGPGDAGAGGEAGAAPAAGGAALRPAPRATVLPAPASDLKLAAYLLDPVRNRYYLVDVA
RQFFGWELEEGPADRPDDPACRTTQLLGRDAALCARLRPAVEAELAARGLERVYREIELP
LVPVLAAMEEAGIAVDRRQLEELGRLFTRRSQELAEQIYQLAGETFNINSTQQLGQILFE
RLGLPVVKKTKTGYSTDAEVLETLAARHPIAELVLEYRSLVKLQGTYVDGLAEHIGPDGR
VHTTFQQTVAATGRLSSTQPNLQNIPIRDEPGRSLRRAFVAPPGHRLVAADYSQIELRVL
AHYSGDEGLLEAFARGQDVHARTASEIFGVPLEQVTPEQRRVAKAVNFGLAYGQTDYGLA
RALRIDRADARRFMDRYFERYPGVKRYMEETIRRARQHGEVTTLLGRRRPVPEIRHRVYH
IRQNAERVAINTPIQGTAADIMKLAMIRVYRALAGEGLRARIVLQVHDELLVEAPEDEVP
AVAALLRREMEGAFPLAVPLVVDVKAGTNWYEMEAVGAGA
NT seq 3183 nt   +upstreamnt  +downstreamnt
ttgtgcccatccagcgctcgccccgacaccaagctcgtcctgatcgacggacacagcctg
atgtatcgggcgtttttcgccctgcccccgctggcgacggcggacggcgtgcccaccaat
gccgtgtacgggttcctcaccatgctgctgcgcctgctcgaggaggtggcgccgcagtac
atcggcgtcgccttcgaccgcggcctgccggccttccgggtcgagcgcttcccggcgtac
aaggggcatcggcccgagcaaccggacgagttgcggccgcagttccccctggtcaaggac
gtcctggccgccatgggcgtggccaccgtcgagcacgagggcttcgaagccgacgatctg
ctgggcacgctggcgcaccgtgcccgggcggccggcgtcgaccgggtgttgctggtgacc
ggtgaccgggacgtgctgcagcttgtcggcgatggggtcgaggtgttgctgacccgcaag
ggcatcagcgatctgcagcggtacgacgaggcgcgcatccgcgaggaaatgggcatcgcc
ccggcccagttcctcgacgtcaaggccctgatgggcgacccctccgacaacatcccgggg
gtgccgggcatcggcgagaagaccgctctcaagctgatccagcagttcggcgacttggag
acggtgctggcccggccggaggccgcgggcggcaagaagctgcccggcctgctgcgccag
tatgccgaccaggcgcggctgagccgggagcttgcccggatccggaccgacgcccccgtc
gagttcgaccccgagcggtttgcccgccggccgcccgacccggcggtgctgcggcctctg
ctgctacgcctcgagttccgcagcctggtggaccggctggggctgcaggccgggcgatcc
acggcgggcacccgtgcctccggggagacgggcccaggggacgggcaggacccgaaccga
gagggccaggccgtggaacgcggcgagcgccaccgccgcccggctgccccggcgccgccg
gtccctgcgccggaggcggccgaggccgccggcgccggagccgagcccgagtggcctccg
gtggacacgttgccggacccggcagccgtagccaggtggctcgaggagcgggtcgctggc
ccgcaagggggggcggtcgccacgcgggaggggccaccggccgacgcggtccgcgggtcg
cggcagggcgcgggcgcggggcagcccgaagcgccgccggctgaggacgggccggcgggc
gagcccgtcaccgtggtcgcggtgctcgccccggcgccgtcgggaccgccgtcccgggcg
gaggcgggtgacgacccaccgacttccgcgacgtcaggggcggccggcggcgggccccaa
ttgggtggcatcgggctggcggcggccggtcgggcggcggcctgggtggccgccggcgcg
accggtgggggcggcgccacgccgggcccggaccagtcggccggtgcggaccaccggacc
ctggcggcagccctgctgcgccggtcgctggccgggttcgacctcaagccgctgtaccgg
tggctgctgcggtcgcaggaggcggaggccggccgcccgcggtcgccggcggagtctgcc
ggccgagggcccggcgacgccggggccggcggggaggcgggcgcggcgccggcagccggg
ggcgcggccctgcgtccggcaccgcgggcaacggtgctcccggcgcccgcctccgacctc
aagctggcggcgtacctgctggaccccgtccgcaaccggtactacctggtggacgtggcg
cgccagttcttcggatgggagctggaggagggccctgccgaccgtcccgacgatcccgcc
tgccgcacgacgcagctgctcgggcgcgacgccgccctgtgcgcccggctgcggcccgcg
gtggaggcggagctggccgcccggggtctggagcgggtctaccgggagatcgagctgccc
ctggtgcccgtgctggccgccatggaggaggccggcatcgccgtcgaccggcgccagctg
gaggagctgggccggctcttcacccggcgcagccaggagctggcggagcagatctaccag
ctggcgggggagacgttcaacatcaactccacccagcagctggggcagatcctcttcgag
cggctgggcctgcccgtggtgaagaagaccaagacgggctattccaccgacgcggaggtg
ctggagaccctggcggcccggcaccccatcgccgagctggtgctggagtaccggtccctg
gtcaagctccagggcacctacgtggacggcctggccgagcacatcggccccgacggccgg
gtgcacaccaccttccagcagacggtggccgccacgggccggctgtccagcacccagccc
aacctgcagaacatccccatccgggacgaacccggccgctccctgcgccgcgccttcgtc
gcgccgccggggcaccggctggtggccgccgactactcccagatcgagctgcgggtcctg
gcgcactacagcggcgacgaggggctgctggaggccttcgcccgcggccaggacgtccac
gcccggaccgccagcgagatcttcggcgtgcccctggagcaggtgacgcccgaacagcgc
cgggtggccaaagcggtgaacttcggcctggcgtacgggcagacggactacggcctggcc
cgcgccctgcgcatcgaccgggccgacgcccgccgcttcatggaccgctacttcgagcgc
taccccggcgtgaagcggtacatggaagagaccatccgccgcgcccgccagcacggcgag
gtgaccaccctgctggggcggcggcggcccgtgcccgagatccgccaccgggtgtaccac
atccggcagaacgcggagcgggtggccatcaacacgcccatccaggggacggccgccgac
atcatgaagctggccatgatccgggtctaccgcgccctggcgggcgaagggctccgggcc
cgcatcgtcctgcaggtccacgacgagctgctggtggaggcgccggaggacgaggtgccg
gcggtggccgccctgctgcggcgggagatggagggcgccttccccttggccgtgcccctg
gtggtcgacgtcaaggccggcaccaactggtacgagatggaggccgtcggcgccggtgcc
tga

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