Thermaerobacter marianensis: Tmar_0479
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Entry
Tmar_0479 CDS
T01388
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tmr
Thermaerobacter marianensis
Pathway
tmr00061
Fatty acid biosynthesis
tmr00071
Fatty acid degradation
tmr01100
Metabolic pathways
tmr01212
Fatty acid metabolism
tmr02024
Quorum sensing
tmr04146
Peroxisome
Module
tmr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tmr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Tmar_0479
00071 Fatty acid degradation
Tmar_0479
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Tmar_0479
09145 Cellular community - prokaryotes
02024 Quorum sensing
Tmar_0479
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tmr01004
]
Tmar_0479
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tmr04147
]
Tmar_0479
Enzymes [BR:
tmr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Tmar_0479
Lipid biosynthesis proteins [BR:
tmr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Tmar_0479
Exosome [BR:
tmr04147
]
Exosomal proteins
Exosomal proteins of breast milk
Tmar_0479
Exosomal proteins of breast cancer cells
Tmar_0479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ADU50600
UniProt:
E6SGW9
LinkDB
All DBs
Position
564249..566117
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AA seq
622 aa
AA seq
DB search
MADSLVGKDGPAVVGDFPWLRFYPAGVRHHLDYPDMPLYGLLDRAARERPEHPAIIFFNR
TITYAQLNHAADRFARALVQRGVKPGDRVALMLPNCPQFVIAYYGTLKAGGVVVNHNPLY
TAPELEFQLNDAGCRVLVALDMTYPTVQKVRPRTRLETVILTRINEYMPALLRLLYPLKA
RRDGTWPEIRDGHDVLWFQDLLAGAGRDGAGSGDGGAAPGGGGPGAARIPVPAGPDDVAL
LQYTGGTTGRPKAAMLTHRNLLANALQTAEWVLQGKVDDGPRHRIMGVIPFFHVYGMTTV
MNLAIAIQGTMILQPRFNAEEVLKGVARYKPTMFPGVPTMYVAILNHPKLRQYDFSSIES
CVSGAAPLPLEVQERFERLTGGALVEGYGLTEASPVTHVNPTGEGKRNGTIGIPLPDTEA
RIVDIETGTRVLGPGEVGELVVRGPQVMKGYWNRPEETERTLRDGWLYTGDIATMDEDGF
FRIVDRKKEMIISGGYNVYPREVEEVLYQHPKVLEAAVVGVPDPYRGEMVKAHVVLKPGE
TATEQEIIEFCRQRLAKYKVPRAVEFRAELPKSLIGKVLRRVLAEEERRRAAEAPAEGPA
AATAAPGAPGADADGDESGRDG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
gtggcggattccctggtggggaaggacggcccggcggtggtcggggacttcccctggctg
cgtttctatccggcgggtgtgcggcatcacctggactaccccgacatgcccctctacggg
ctgctcgacagggccgcgcgggagcggccggagcaccccgccatcatcttcttcaaccgc
accatcacctacgcccagctcaaccatgccgccgaccgcttcgcccgcgccctggtgcaa
cggggggtgaaacccggggaccgggtggccctcatgctgccgaattgcccgcagttcgtc
atcgcctactacggcaccctcaaggcgggcggggtggtggtcaatcacaacccgctctat
accgcccccgagctggagttccagctcaacgacgccggctgccgggtgctggtggccctg
gacatgacgtatcccacggtgcagaaggtccggccgcgcacgcgcctggagaccgtgatt
ctcacccgcatcaacgagtacatgcccgccctgctgcgcctgctgtacccgctgaaggcc
aggcgggacgggacctggcccgagatccgcgacggccatgacgtgctctggttccaggac
ctgctggccggggcaggtcgcgatggggccgggagcggggatggaggggcggcgcccggg
ggcggcgggccgggagccgcccggattcccgtaccggccggtcctgacgacgtggccctg
ctgcagtacaccggcggcaccaccgggcgccccaaggcggccatgctcacccaccgcaac
ctgctggccaacgccctgcagaccgccgagtgggtgctccagggcaaggtggacgacggt
ccgcgccaccggatcatgggcgtcatccccttcttccacgtctacggcatgaccaccgtg
atgaacctggccatcgccatccagggcaccatgatcctgcagccccgcttcaacgccgag
gaggtgctcaagggcgtcgcccgctacaagcccaccatgttccccggcgtgccgacgatg
tacgtggccatcctcaaccatcccaagctgcggcagtacgatttctcgtccatcgagtcg
tgcgtcagcggtgccgcgccgctgcccctggaggtgcaggagcggttcgagcggctgacg
ggcggcgccctggtggagggatacggcctgacggaggcctcgccggtgacccacgtgaac
ccgacgggcgagggcaagcgcaacggcaccatcggcatccccctgcccgacaccgaggcc
cggatcgtcgacatcgagacgggcacccgggtgctgggtccgggcgaggtgggcgagctc
gtcgtccgcggcccccaggtgatgaaggggtactggaaccggccggaggaaacggagcgc
accctgcgggacgggtggctgtacaccggcgacatcgccaccatggacgaggacgggttc
ttccggatcgtggaccggaagaaggagatgatcatcagcggcggctacaacgtctacccg
cgcgaggtggaggaggtcctctaccagcatcccaaggtgctggaggcggcggtggtcggc
gttcccgatccctaccgcggggagatggtcaaggcgcacgtggtcctcaagccgggcgag
acggccacggagcaggagatcatcgagttctgccgccagcggctggccaagtacaaggtg
ccgcgggccgtggagttccgcgccgagctccccaagagcctgatcggcaaggtcttgcgc
cgggtcctggccgaggaggaacgccggcgggcggcggaggcgccggcggaggggccggcg
gcggccacggcggccccgggggccccgggggccgatgccgacggggacgaatccggccgg
gacggctga
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