KEGG   Thermaerobacter marianensis: Tmar_0957
Entry
Tmar_0957         CDS       T01388                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
tmr  Thermaerobacter marianensis
Pathway
tmr02024  Quorum sensing
tmr03060  Protein export
tmr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tmr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Tmar_0957
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Tmar_0957
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Tmar_0957
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tmr02044]
    Tmar_0957
Enzymes [BR:tmr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Tmar_0957
Secretion system [BR:tmr02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Tmar_0957
  Eukaryotic Sec-SRP protein
   Tmar_0957
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA AAA_33 AAA_17 AAA_16 Zeta_toxin CLP1_P AAA_30 APS_kinase AAA_28 MMR_HSR1 cobW AAA_31 DUF2852 nSTAND3 AAA_5 NACHT ResIII AAA_18 6PF2K ParA Thymidylate_kin AAA_19 AAA_24 AAA Mg_chelatase ArsA_ATPase AAA_25 Flu_M1 HHH_6 AAA_7 MobB ATP_bind_1
Other DBs
NCBI-ProteinID: ADU51070
UniProt: E6SJE2
LinkDB
Position
1167989..1169326
AA seq 445 aa
MAFEGLAEKLQSVFKRLRGKGKLTEADVEAALREVRLALLEADVHFKVVKDFIARVRQRA
VGQEVLESLTPAQQVIKIVHDELTQLMGGQQARLDLGGAPPVPVMLVGLQGSGKTTTAAK
LARLLARQGRQPLLVAADVYRPAAVEQLVTLGQQIQLPVHAPGTDRDPVDIAREGVAEAR
RRGRDVVIIDTAGRLHIDDALMEELERIRQAVAPREILLVVDAMTGQDAVNVAETFHRRL
GIDGVVLTKLDGDARGGAALSVRAVTGRPIKFVGLGERVDQLEPFHPERMASRILGMGDV
LSLIEKAQAAFDAQQAQRLERKLREQTFDLEDFLEQLRQVRKMGPLDQLLAMIPGLGPRL
KDVTVDEGELRRIEAIIQSMTPEERRHPEIINASRRRRIARGSGTRVQDVNRLLKQFAET
QRLMKQVTGAARRGRRGLGNLPFPR
NT seq 1338 nt   +upstreamnt  +downstreamnt
gtggccttcgaaggcctggcggagaagctgcagtcggtgttcaagcggctgcgcgggaag
ggcaagctcacggaggccgacgtggaggccgccctccgggaagtccgcctcgccctgctg
gaagccgacgtccacttcaaggtggtcaaggacttcatcgcccgggtgcggcagcgggcc
gtcggccaggaggtgctggaaagcctcacgccggcccagcaggtcatcaagatcgtccac
gacgagctgacccagctgatgggcggacagcaggcccggctggacctgggcggcgcgccg
ccggtgccggtcatgctggtgggcctgcagggctcgggcaagaccaccaccgccgccaag
ctggcgcggctgctggcccgccaggggcgccagcccctgctggtggccgccgacgtctac
cggccggcggcggtggagcagctggtcaccctgggccagcagatccagctgcccgtccac
gcgccgggcaccgaccgcgacccggtggacatcgcccgggagggcgtggccgaggcgcgg
cggcggggccgggacgtggtgatcatcgacaccgccggacggctccacatcgacgacgcc
ctgatggaggagctggagcgcatccggcaggcggtcgcaccccgggagatcctgctggtg
gtcgacgccatgaccggccaggatgccgtcaacgtggcggagaccttccaccggcgcctg
ggcatcgacggcgtggtcctgaccaagctggacggcgacgcccggggtggcgccgccctg
tcggtacgggcggtgacgggccggcccatcaagttcgtcggcctgggcgagcgggtcgac
cagctggaacccttccaccccgagcgcatggcctcccgcatcctgggcatgggtgacgtg
ctgtccctgatcgagaaggcccaggcggccttcgacgcccagcaggcccagcgcctggag
cgcaagctgcgggagcagaccttcgacctggaggacttcctggagcagctgcgccaggtg
cgcaagatgggtcccctggaccagctgctggccatgatcccggggctgggcccgcggctc
aaggacgtcaccgtggacgagggggagctgcggcgcatcgaggccatcatccagtccatg
acgccggaggaacggcggcacccggagatcatcaacgccagccgccggcggcgcatcgcc
cgcggcagcggcacccgggtgcaggacgtcaaccggctgctcaagcagttcgccgaaacc
cagcggctgatgaagcaggtgacgggcgccgcccgccgcggccggcgagggctgggcaac
ctgcccttcccgcgctag

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