Thermaerobacter marianensis: Tmar_1063
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Entry
Tmar_1063 CDS
T01388
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tmr
Thermaerobacter marianensis
Brite
KEGG Orthology (KO) [BR:
tmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmr03016
]
Tmar_1063
Enzymes [BR:
tmr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Tmar_1063
Transfer RNA biogenesis [BR:
tmr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Tmar_1063
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ADU51176
UniProt:
E6SK35
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All DBs
Position
1287286..1288098
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AA seq
270 aa
AA seq
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MTRITGPGVAVPGGTNAAPHGSGWRSGLRGGAGGLPLEAAARPAGQGDGRRAGRQEAGAG
PAGSRPQGNAPATAGGDGERWRLFIAVPVTGPAAGTLQAWMAAGRRQRPGLKWVEPHHLH
VTLRFLGERPAAEVPALVAAGARVAGAAAPVEAEIRGVGGFPDIGRARTVWAGVAAGAAE
LAGMAAGLERELLAVAPDLDPVTQPFRAHVTLARVRGGWIDLTAWPHAAGARDRVWGRLV
VREMVLFRSQLRPGGPVYTPLHRWGLGSRD
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggatcaccgggcccggcgtagccgttcccggcgggaccaacgcggcgccgcat
ggcagcgggtggcggagcggcctgcgcggcggcgccggaggccttcccctggaagctgcg
gcgaggccggcgggccagggggacggccgccgcgccgggcgccaggaggcgggggctggc
cccgcggggagccggccgcaggggaacgcgcccgccacggcgggaggcgacggcgaacgc
tggcgcctcttcatcgccgtacccgtgacgggcccggcggcggggaccttgcaggcctgg
atggccgcgggccggcggcagcgccccggcctcaagtgggtcgaaccccatcacctccac
gtcaccttgcgctttctcggcgagcggccggcggcggaggtccccgccctggtggcggcg
ggagcccgggtggccggggccgcggcaccggtggaggccgagatccgcggtgtgggcggc
ttccccgacatcggccgcgcccgcaccgtgtgggcgggcgtggcggcgggtgcggcggag
ctggccggcatggccgcggggctggagcgcgagctgctggccgtggcgccggacctggat
cccgtgacccagcccttccgcgcccacgtcaccctggcgcgggtgcggggcggctggatc
gacctgacggcctggccccatgccgccggggcgcgggaccgggtgtgggggcggctggtg
gtgcgggagatggtgctcttccgcagccagttgcggccgggcggtccggtgtacacgccg
ctgcaccgctggggcctgggatcccgggattga
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