KEGG   Thermaerobacter marianensis: Tmar_1129
Entry
Tmar_1129         CDS       T01388                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
tmr  Thermaerobacter marianensis
Pathway
tmr03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tmr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Tmar_1129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tmr03400]
    Tmar_1129
DNA repair and recombination proteins [BR:tmr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Tmar_1129
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: ADU51242
UniProt: E6SKN4
LinkDB
Position
complement(1367011..1368042)
AA seq 343 aa
MRSLWRGVVSFGLVNIPVRMYLAVDEKSVHFRQLHRLCGTPVRYRRWCPRCDVEVRPEDL
ARGYEYAPDRFVLITDEDLAGLPLPTARAIEILDFVRGEEIDPIYFQRSYYLEPAEGGEK
AYRLLRRAMDLRRCVAVAKVALRNKETLACLRTVRHQALALVAMAYPDEVRPLEALPAFA
ALGPPEPAATGPNGATPAAGPGAETGARRDGAAAGAQAPGFGTGTRAGTPSGPYGDGPAG
PVTGNGYGGFGGDARGLLPGATADRELELALHLIDRLTTRFDPTRYRDRYREALLAVVER
KIEGREAVVTPPEPAPVVDLMEALRASLERVESRRDQVGTPAR
NT seq 1032 nt   +upstreamnt  +downstreamnt
gtgcgcagcctgtggcggggcgtcgtcagttttggcttggtcaacatcccggtccgcatg
tacctggcggtggacgagaagtcggtgcacttccggcagttgcaccggctatgcggcacg
cccgtccgctaccgccgctggtgcccgcgctgcgacgtggaggtccggccggaggacctg
gcccgcggctacgagtacgctccggaccggttcgtcctgatcaccgacgaggacctggcc
ggcctgcccctgcccacggcccgcgccatcgagatcctggacttcgtgcgcggcgaggag
atcgaccccatctacttccagcgcagctactacctcgagccggcggagggcggggagaaa
gcctaccgcttgttacgccgcgccatggacctgcgccggtgcgtggccgtcgccaaggtc
gccctgcgcaacaaggagaccctggcgtgcctgcggaccgtccgccaccaggccctggcc
ctggtggccatggcgtaccccgacgaggtgcggccgctggaggcgctgccggctttcgcg
gccctgggcccgccggagccggcggcgacggggccgaatggcgccaccccggcagcgggc
ccgggggctgagaccggtgcgcgccgggacggggcggcggccggtgcccaggccccgggt
tttggaacgggaacgagggcgggcaccccgtccgggccctacggcgacggccctgccggt
ccggtgacggggaacgggtacggcgggttcggcggcgacgcccgcgggctcctccccggc
gcgaccgcggatcgcgagctggagctggccctccacctgatcgaccggctgacgacccgc
ttcgatcccacccggtaccgcgaccggtaccgcgaagccctgctggccgtggtggagcgg
aagatcgagggacgggaggccgtggtcaccccgccggaaccggcgccggtcgtcgatctc
atggaggcgctgcgggccagcctggagcgggtggagtcccggcgcgaccaggtggggacg
ccggcccggtag

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