Thermaerobacter marianensis: Tmar_2127
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Entry
Tmar_2127 CDS
T01388
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
tmr
Thermaerobacter marianensis
Pathway
tmr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tmr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tmar_2127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmr03021
]
Tmar_2127
Transcription machinery [BR:
tmr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tmar_2127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
V-SNARE
Motif
Other DBs
NCBI-ProteinID:
ADU52208
UniProt:
E6SJX5
LinkDB
All DBs
Position
complement(2565238..2566539)
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AA seq
433 aa
AA seq
DB search
MDASEVKSQLLEIDEVKRLVDRGRQQGGVLSEDEISDALQAVDLDPDQVEEIYQLLEDMG
IEVETGPRRSRNRTRGNRVNQNHRTRASDRALDGVDGVVDEVSLDGVTALHRADDLEAGD
DDEGDESRDGDEAGDGTGVDQLGEPVDDDDDLSMPDGVALDDPVRMYLKEIGRIPLLTPE
QEIELAKRIEQGDEEAKRKLIQANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAAEKF
DYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLVQELGREPT
PEEIAKEMGIEPEKVREIMKIAQEPVSLETPIGEEEDSHLGDFIEDEDALAPAEAASQLL
LREQLEDVLHTLTDREQKVLRLRFGLDDGRQRTLEEVGQVFGVTRERIRQIEAKALRKLR
HPSRSKKLKDFLE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggatgccagcgaggtcaagagccagctgctggagatcgacgaggtcaagcgcctggtc
gatcggggacgccagcagggcggcgtgctgtccgaagacgagatcagcgacgccctgcag
gctgtcgacctggatcccgaccaggtagaggagatctaccagctgctggaggacatgggc
atcgaggtggagacgggtccccgccgttcgcggaaccgcacccgtggcaaccgggtgaac
cagaatcaccggacccgggcgtcggaccgcgccctggacggcgtggacggcgtcgtggac
gaggtctccctggacggcgtgaccgccctgcaccgggccgatgacctggaggccggcgac
gacgacgaaggggacgagtcccgggacggcgacgaggccggcgacggcaccggcgtcgac
cagctcggcgagcccgtcgacgacgatgacgatctgtcgatgcccgacggcgtcgcgctg
gacgatccggtgcgcatgtacctcaaggagatcgggcgcatccccctcttgacgccggag
caggagatcgagctggctaagcggatcgagcagggtgacgaagaggccaagcgcaagctg
atccaggccaacctgcgcctggtggtcagcatcgccaagcgctacgtggggcgcggcatg
ctgttcctggacctgattcaggagggcaacctcggtctcatcaaggcggcggagaagttc
gattatcgcaagggcttcaagttcagcacttatgccacgtggtggatccgccaggccatc
acgcgggccatcgcggatcaggccaggaccatccgcatccccgtgcacatggtggagacc
atcaacaagctcatccgcgtccagcgccagctggtgcaagagctcggaagggaaccgacg
ccggaagagatcgccaaggagatgggcatcgagccggaaaaggtgcgggagatcatgaag
atcgcccaggaacccgtgtccctggagacgcccatcggtgaggaagaggacagccacctg
ggcgacttcatcgaggacgaggacgccctggcgccggcggaggccgcttcccagctcctg
ctgcgggagcagctggaggatgtgctccacaccctgacggaccgcgagcagaaggtgctg
cggttgcgcttcggcctggacgacgggcgccagcggacgctggaggaagtgggccaggtc
ttcggcgtgacccgcgagcggatccgccagatcgaggccaaggcgctgcgcaagctccgt
cacccgtcgcggagcaagaagctcaaggacttccttgaatga
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