Thermaerobacter marianensis: Tmar_2268
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Entry
Tmar_2268 CDS
T01388
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tmr
Thermaerobacter marianensis
Pathway
tmr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tmar_2268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmr03021
]
Tmar_2268
03400 DNA repair and recombination proteins [BR:
tmr03400
]
Tmar_2268
Enzymes [BR:
tmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tmar_2268
Transcription machinery [BR:
tmr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tmar_2268
DNA repair and recombination proteins [BR:
tmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tmar_2268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Ig_GpJ_C
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ADU52346
UniProt:
E6SKX3
LinkDB
All DBs
Position
complement(2735730..2736677)
Genome browser
AA seq
315 aa
AA seq
DB search
MNEMEKPTIETVEISEDGTYGRFVVEPLERGYGITLGNALRRVLLSSLPGAAVTSVRIEG
VLHEFSTIPGVVEDTTEIILNLKELAIKMHTDEPQILRVEAQGEGEVRAADIIAPPEVEI
VNGDHLIATLEHDGRLFMEMTVQRGRGYVPADRNKGPDRSIGLIPVDSIFTPIRKVNFQV
ENTRVGKVTDYDRLTLEIWTNGTVAPDEAASQAARILTDHLALFLTLTDQTRGAGTAAEK
EDDARAKLLEMSIDELDLSVRSYNCLKRAGINTIGELVEKTPEDMMRVRNLGKKSLEEVE
EKLAALGLSLKQPED
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagatggagaagccgaccattgagacggtcgagatcagcgaagacggcacgtac
ggccggttcgtggtcgagccgctggagcgcgggtacggcattaccctgggtaacgccctg
cgccgcgtgctgctctcgtcgttgccgggtgcggcggtgaccagcgttcgcatcgaaggc
gtgctccacgagttctccaccatccccggcgtggtggaggacacgacggagatcatcttg
aacctcaaggaactggccatcaagatgcacaccgatgaaccccagatcctgcgcgtggag
gcccagggcgagggggaggtgcgggcggccgacatcatcgcgccgccggaggtggagatc
gtcaacggggatcacctgatcgccaccctggagcacgacggccggctcttcatggagatg
acggtccagcggggccgcggctacgtgcccgccgaccgcaacaaggggccggatcggtcc
atcgggctgattcccgtcgactccatcttcacgcccatccgcaaggtgaacttccaggtg
gagaatacacgggtgggcaaggtgaccgactacgaccgcctgaccctggagatctggacc
aacggcaccgtggcgccggacgaggcggccagccaggcggcccgcatcctgaccgaccac
ctggcgctgttcctcaccctgacggaccagacccggggtgccggcaccgcggcggagaag
gaagacgacgcccgcgccaagctgctggagatgagcatcgacgagctggacctgtccgtc
cgctcgtacaactgcctgaagcgggcaggcatcaacaccatcggggagctggtggagaag
accccggaggacatgatgcgggtccgcaacctgggcaagaagtcgctggaggaagtcgag
gagaagctggctgccctggggctctcgctgaagcagccggaagactga
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