Tremella mesenterica: TREMEDRAFT_11403
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Entry
TREMEDRAFT_11403 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
tms
Tremella mesenterica
Pathway
tms03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TREMEDRAFT_11403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_11403
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
TREMEDRAFT_11403
SWR1 complex
TREMEDRAFT_11403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
18491026
NCBI-ProteinID:
XP_007003160
JGI:
Treme1_11403
LinkDB
All DBs
Position
Unknown
AA seq
1056 aa
AA seq
DB search
DPDADDVEYADQTSEIDQQDQALDVEMEDAESSTDDGEDAGLVADADVPIEDLLKRYGYT
LPEPEAEQPSVDIEIKPATHEAQDTSIVAEITNGDIIVDQSLTDEVLAKKSPTPGLIIEG
KRQRRARAVWSPTAVPPPPPPPPSRPKVVVIKDDEEVEEDGQEEAEEHEDTPEMTSEEEI
TDDEDEMEVDEDEIHHVRQPILLRGTLRPYQQAGLEWLASLYANNMNGILADEMGLGKTI
QTIALLGHLACDKGVWGQHLIIVPTSVILNWEMEFKKFFPGMKVLTYYGNQKERKDKRVG
WHTENAWQVCITSYQIVLADQHIFRRKSWVYMILDEAHNIKNFRSQRWQTLLGFKAQRRL
LLTGTPLQNNLMELWSLLYFLMPNGVTADATAVVGFANHKEFMEWFSNPMDKAVESGDTL
DEGILETVAKLHTLLRPFILRRLKSEVETQLPGKFEHVVYCKLSKRQRFLYDEFMSRAST
KEALTSGGYLGVVNTLMQLRKVCNHPDLFEVRPVRTSFAMERSVVADYEPCELLIRRRLL
SQMDEVDLQDFLVTSREGESAWVCRTRRELDASDRLPHAIELPRRGKQPQGPKMDTRTLE
GWLRYKSHLEEQASKIRWRSLRDINQIRCRRSPIYGTTLLSRLSDLSNFLLPSNIPKRRP
KDMFGDHHPPVSSLVISYEDRAKQMIPITEKYAVIPPTVVTRDMTKYSLPGLKPISHPEI
LSPSFDTLHHSAVKLQIAFPDSSLLQYDCGKLQKLYEMLRQLKINGHRIIIFTQMTRVLD
ILEMFLSYNGHRYLRLDGSTKIEDRQILTERFNSDSRIFVFIASSRSGGVGINLTGADTV
FFYDSDWNPSMDRQCMDRAHRIGQTREVNIYRFVSSHTVEENMLKKANQKRLLDKMVIQQ
GDFTTEFFGKMDWRDMLDENEHSIPVETNGEREEREEGVVDIEIEKDSLDGEEGNMNPRI
GEEKELVKVLEEVEDVEDAEAARLAQGEVELDFQEFTESRQMVKSKSPNLQRGLSQVTQL
GNEKQEQEEEEEDVGGVDEYMLKMVEWDWEWFSQFK
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
gatccagatgccgacgatgtcgagtatgccgatcaaacgagcgagatcgatcagcaagat
caagctctcgatgttgagatggaagatgctgagagttcgacggacgacggtgaggacgct
ggactggtcgctgatgcggatgtgcctattgaggatcttttgaagcgatacgggtatacc
ttgccggaacccgaagctgaacagcctagtgttgatatcgaaatcaagcctgctactcat
gaagctcaagacacttccatagtggccgaaataacgaacggcgatatcatcgttgaccaa
tctttgaccgacgaagtcttggccaagaagtcaccgactccagggttgatcatcgaaggt
aagcgacaacgacgcgctagagccgtttggtctccgacggctgtccctcctccaccaccc
ccacctccaagtcggccgaaggttgttgtaatcaaggatgacgaagaggtggaagaggac
gggcaagaggaagcggaagagcacgaggatacgccggagatgacgagtgaagaggagatc
accgacgatgaggatgaaatggaagtggatgaggatgagattcatcatgttcgccaacct
atcctccttcgaggaacattgcgcccatatcaacaagcgggtctcgagtggctagccagt
ctctacgccaataacatgaacggtattctcgctgatgagatgggtctcggaaaaaccatt
cagaccatcgctcttctaggtcatctggcttgtgataaaggtgtttggggacaacactta
attatcgtacccacttccgtcatactcaattgggaaatggaattcaagaagtttttcccc
ggtatgaaagttttgacttactacggaaatcaaaaagaacgtaaagataaacgtgtaggt
tggcataccgaaaatgcttggcaagtctgtatcacatcgtatcaaatcgttcttgccgat
caacatattttccgtcgaaagagttgggtttatatgatattggacgaagcgcataacatc
aagaactttcgttcacagagatggcaaactttacttgggtttaaagctcagagaaggttg
ttattgacgggtactccgttgcaaaataatttgatggaattatggtcattgttatatttc
ttaatgccgaatggagttacggcggacgctacggcagttgtagggttcgctaatcataaa
gagtttatggagtggttttcaaatcccatggacaaagccgttgaatctggcgatacattg
gacgaaggtatacttgaaaccgtagctaaactacatactcttctccgtccgttcatcctc
cgtcgattgaagagtgaagtcgaaactcaacttcctgggaaattcgaacatgtcgtatat
tgcaaactttccaaacgtcaacgattcttatacgatgaattcatgtcacgggcatctacc
aaagaagctcttacttcgggtggttatctcggagttgtcaatactttgatgcagttgagg
aaagtttgtaatcacccggatttattcgaagtcagaccagtacgaacgagcttcgccatg
gaacgttcagtggtagcggattacgaaccctgtgaattactcatacgtcgtcgtttgttg
tcccaaatggatgaagtggatctacaagatttcctcgttacgtctcgtgaaggagaatcc
gcttgggtttgtcgaacgagaagggaactcgatgcgagtgaccgattacctcatgctatc
gaattacctcggagaggaaaacaacctcaaggtcccaaaatggatacaaggactttggaa
ggatggttaagatataaatctcatttagaagaacaagctagtaaaattcgatggagatct
ttaagagatatcaatcaaatacgttgtcgacgttcacctatttatggtacaacactatta
tcacgtttatccgatttatcaaattttctacttccttccaatatcccaaaacgtcgacct
aaagatatgttcggtgatcatcatcctccagtttcatctttagttatatcatacgaagat
cgagctaaacaaatgatacctatcacggagaaatatgccgttataccaccaacagtcgtt
actcgagatatgactaaatattctcttccaggattaaaaccaatttcccatcctgaaatc
ttatcaccttcattcgatactttacatcattcagcagtcaagttacaaatcgcttttcca
gattcttccttgttacaatacgattgtggtaaacttcaaaaactctacgaaatgttacgt
caactgaaaatcaatggtcatcgtataatcattttcactcaaatgacacgtgtattagat
atcttggaaatgttcttatcatataatggtcatcgatatttacgtttagacggttcaacg
aaaattgaagatcgtcaaattttaactgaaaggtttaatagtgattcaagaatattcgtt
tttatagcttcttcaagatcaggtggtgttggtattaatttgactggagcagatactgtt
ttcttttatgattcagattggaatccttctatggatagacaatgtatggatagagcacat
aggattggtcaaactcgtgaagttaatatttatagattcgtttctagtcatacggtagaa
gagaacatgttaaagaaagctaatcaaaaacgtttattggataaaatggtcatacaacaa
ggtgatttcactacggaattctttgggaagatggattggagagatatgttggatgagaat
gaacattctattccggttgaaaccaatggagaaagagaagaaagagaggaaggtgtggtg
gatattgagattgaaaaagattcattggatggagaagagggaaatatgaatccgaggatc
ggagaagaaaaggaattggtaaaagttttagaagaagtggaagatgttgaagatgcagaa
gcggcaagattagctcaaggagaagtagaattggattttcaagaatttacagaaagtcga
caaatggttaaatctaaatcgccaaatttacaacgagggttatctcaggttacgcagtta
gggaatgaaaaacaggagcaagaggaggaggaggaggatgtgggtggagttgatgagtat
atgttaaagatggtggaatgggattgggaatggttttctcaatttaaa
DBGET
integrated database retrieval system