Tremella mesenterica: TREMEDRAFT_11630
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Entry
TREMEDRAFT_11630 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K12236
transcriptional repressor NF-X1
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tms03000
]
TREMEDRAFT_11630
04121 Ubiquitin system [BR:
tms04121
]
TREMEDRAFT_11630
Transcription factors [BR:
tms03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
TREMEDRAFT_11630
Ubiquitin system [BR:
tms04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
TREMEDRAFT_11630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
18491030
NCBI-ProteinID:
XP_007002226
JGI:
Treme1_11630
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
KSRKKEEEKDDLTSRLIRGLGKRPFTECPIVPPPLRISDDPPEWRCPGCRKSRIVAPGAY
ICFCGRLTNPPTSNIAPHSCEDLCSRRRGGCDHPCPLTCHPGPCPPCQTALIVPCPSHHT
PLAVKCAVVSGNTEIGKMGAVCDEICGRSLGCGNPAHVCQAPCHHGACNPCAQTQVVMCY
CGQESRVVACGSMRQEEKRCASIGEDGVEEHWNGRFSCGKECDRFYDCGIHPCKEKCHPH
PSIPLPCPTSPNLIHTCPCGLTPLSSLPAPPRTSCINPIPTCDKSCPRSRPCGHACPQKC
HVGECPPCHSEVVRPCRCGESVVVLECDELRKLLDSGGEVMCERVCGALRNCGRHECGRV
CCPLSYQGKNRKKRGIMTPMIDREDDLHVCELTCGRLLSCGLHTCAKKDHRGACGRCLES
SFDELICNCGRTIIQPPVPCGTILTCPFPCSRPSPSCGHPKSPHPCHQTPDCPPCPYLTT
RPCACGKDLHVKNVRCSQDRVSCGQRCNLLLECGYHRCLLSCHKTGECQPCNQICSKPKR
ICKHPCMLTCHAPIKCQENSPCHTIVVQTCSCGHLQNRTNCGASTNNPITREGIGIKCNS
ECLVRQRNVRLADALGIKVDKEKTFDWSLELKSFASNNIGFVKMVEDTFAEFIKGTRSNM
ILPHMPPAKRTFVISLADQYRLSRELIDAEPNRSVQIRRKIDTRIPPVLLSQVSQTPTIA
SKLRSVLPNSKPNTS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
aaaagcaggaagaaggaagaagagaaagacgatttgacctcgcgattgattcggggttta
ggaaaaagaccattcaccgaatgtcccatagtacctcctccactacgaatttccgatgat
cctcctgaatggcgttgtccaggttgtcgaaaatcccgaatcgtcgctcctggagcttac
atttgtttttgcggtagattgaccaatccacccacttcgaacatcgcccctcattcatgt
gaagatttatgttctcgtcggagaggaggatgtgaccatccatgtccactgacttgtcat
cctggaccttgtccgccttgtcagacagctttgatcgtaccttgtccttcacaccatact
cctttagccgtgaaatgcgcagtggtcagtggtaacacggagataggtaagatgggagcg
gtttgtgatgagatttgtgggagatctttgggatgtggaaatccggctcatgtttgtcaa
gccccatgtcatcacggcgcatgtaatccatgtgctcaaactcaagtagtaatgtgttat
tgtggccaagaatctcgcgttgtggcatgcggaagtatgcgtcaagaagaaaaacgttgt
gcgagtatcggtgaagatggtgtagaagaacactggaatggtcgtttcagttgcggaaaa
gagtgtgatagattctatgattgtggaatccatccttgcaaagagaaatgtcatccccat
ccttctataccactaccatgtcctacttctccaaacctcattcatacctgtccttgtggt
ctcacacctctttcttccctcccggcccctccacggacatcatgtatcaaccctatccca
acatgcgacaagtcttgtcctcgttcacgtccttgtggacatgcttgtcctcagaaatgc
catgttggtgaatgtcctccgtgtcattcggaggtggttcgaccatgtagatgtggagag
agtgtggtggttttggaatgtgatgaattgagaaaattgttggattctggtggagaggtg
atgtgtgaacgagtatgtggggctttgaggaattgtgggagacatgaatgtgggagggtg
tgctgtcccctctcttaccaaggcaaaaatcgcaagaaacgaggaatcatgacacctatg
atcgaccgagaagacgatttacacgtatgtgaactgacatgcggacgattactcagttgt
ggattacatacgtgtgctaagaaagatcatagaggtgcatgtggacgttgtttggaatca
tcatttgacgaactcatttgtaattgtggtcgtaccatcattcaacctcccgtaccatgc
ggtacaatattgacttgtcctttcccttgttctcgtccttcaccatcatgtggacatcct
aaatctcctcatccatgtcatcaaacacctgattgtccaccttgtccatatttaaccact
cgaccatgtgcatgtggtaaagatcttcatgtcaaaaacgttcgttgttcacaagatcgt
gtttcttgtggacaacgttgtaatcttttattggaatgtggttatcatcgttgtttatta
tcttgtcataaaacaggagaatgtcaaccttgtaatcaaatttgttcaaaaccaaaaagg
atttgtaaacatccttgtatgttaacatgtcatgctcctatcaaatgtcaagaaaattca
ccttgtcacactatcgtggttcaaacttgttcttgtggacatttacaaaaccgaacgaat
tgtggagcttcaacaaataatccgataacaagagaaggaataggtataaaatgtaattct
gaatgtttggtaagacaaaggaacgtgagattggcggatgctttaggaattaaagttgat
aaggagaaaacttttgattggtctttggaattgaaaagttttgctagtaataatatcggt
tttgtcaaaatggtagaagatacttttgccgagtttattaaaggtactaggagtaatatg
attttacctcatatgcctcctgctaaaagaacattcgtcatatctctagccgaccaatat
cgtctttcacgtgaattgatagatgcagaacccaatcgttccgtacaaatcagaaggaaa
atagatacacgtatcccacctgttttactctcacaagtttctcaaactccgacgatcgct
tcgaaattaagatctgtattacccaattcgaaaccaaacacttct
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