Tremella mesenterica: TREMEDRAFT_12051
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Entry
TREMEDRAFT_12051 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_12051
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_12051
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
TREMEDRAFT_12051
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
TREMEDRAFT_12051
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
TREMEDRAFT_12051
microRNA pathway
RISC loading complex
TREMEDRAFT_12051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoL2
PAZ
ArgoMid
ArgoL1
Motif
Other DBs
NCBI-GeneID:
18491041
NCBI-ProteinID:
XP_007000399
JGI:
Treme1_12051
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
RPGYGTNGRQLSILANFYQVRALGGKGRVIHHYDIEIDPAVPVTNQKKPKSLMRTVWEQL
VVEQVCANSDWTPGFKTCAFDGRKNAFTPIEFPIPRDVTHTFTTAITHDAVVQRSRNDSS
SDEEMKRWKVKVRHVAIIDLELVMKYCRADEGAPSNEEQVLTGVMAVNVLMRDHPSRTYA
QCGASGNRFFTIEQAVAISHGAIVARGFMQSFCYSSSGRPLLNLDIGFSAFLDSGPLLQL
LPKLIGRGMGGERGRNPPPGGYYGGVQSTPEITELNEMEIKRLKDTLRGAKFRVTHRHSS
RLHTVMSVTLQSAERITFSMQSKDGRGQDQVLSLPQYFRDYYQATITRPRLPCIQYGKKS
FIPFEFVELAEWNSVAAMKLTPDQTAEMIRISAVKPRERAAKIQQWRVDLAYEKQEKISA
WGLQVNKQMVELKARVLAAPSVKYANVDVRPEGGEWSLRAKKASCCFIPLKAWAFISFDK
FLDEDPMRRYIQYLIDVLEAHGVEVENRHPPCIGPINPFNEARRLEALQEAARDAYRAGK
RNPQLICVILPGKDAWLYEAIKKSSFVDLKAPVPTQCMQAAKIRTHRGIEAYTENLVMKI
QSKLGGITHRIPFNQLPGMVHGRTMLLGADVGHPPIKPGLDNAPSVACSIATTNPDCDAF
TPQIRLQRGRGEIICDLADMVVNHLRIFKDRNGEYPERILIFRDGVSEGQYAATLQYEHH
AVHQACERLQRGYRARILVCICAKRHNTRFFGSELDIDKTGNLPSGLVVDRSVTHPFVFD
FFLQAHSSRAGTARPTHYVCLLDELGMTPDELQQLVYNLCHSFSRCTKSVSLVPVCYIAD
LVCQKARIIVHERGGSTTAPSESSG
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
aggccaggttatggcaccaacggccggcagctatctatactggcaaatttctatcaagtc
agggcattgggaggtaaaggtcgtgtcattcatcactatgacatcgaaatcgatcccgcg
gtcccagtaacgaatcaaaagaagcccaaaagtctcatgaggaccgtttgggagcagctg
gtggtcgagcaagtttgcgcgaattcggattggacccccggattcaagacatgtgcgttt
gatggacgtaagaatgcgtttactccgatcgagttcccgatcccgcgagatgtgacccac
acttttactactgccattacccatgatgctgtcgttcagcgtagtcgaaatgactcgtct
tccgatgaagagatgaaaaggtggaaggtcaaggtccgccacgtcgcgatcatcgatctc
gaattagtgatgaagtactgtagggcggatgaaggagcgccaagcaatgaagaacaagta
ctgacaggtgtcatggctgtgaacgtcctgatgagggatcatcccagtcgcacctacgcc
cagtgtggtgcctctggcaatcgattcttcaccatcgagcaagctgtggccatctctcac
ggggccatcgtcgcccgtggcttcatgcaatcattctgttattcaagctcagggcgccct
ctgttaaatctggacattggcttctccgcctttctggactctggtccactcctgcagctg
ctccccaaactcattggtcgcggtatgggtggagagagggggcgcaacccaccgcctgga
ggatactacggtggcgtacagagcactcctgagatcaccgaactcaacgagatggagatc
aagaggcttaaggacacactccgaggtgccaagtttcgagtaacacatcgacacagtagc
cgtctccacaccgtcatgtctgtcacattgcaaagcgccgagcgtatcaccttctccatg
cagagcaaagacgggcggggtcaagatcaagtactttcccttccgcagtatttcagagac
tactatcaggctacaatcaccaggcccaggctaccttgcatacagtatgggaagaaatct
ttcattcccttcgaattcgtcgagctggctgagtggaactccgtggcggcgatgaagctc
actcctgatcaaacggcagaaatgatacgcatcagtgcggtgaagcctcgagaaagagcg
gcgaagatacaacaatggcgagttgaccttgcctatgagaaacaagagaagatttcggcc
tggggcttgcaagtaaacaaacagatggtagagctcaaagcgcgagttctggctgcacct
tcagtgaagtatgccaatgtggacgtgcgccccgaaggtggagaatggagtctccgtgcc
aaaaaggcgagttgctgcttcatccccctgaaagcatgggccttcatctcgttcgataaa
tttctggacgaggacccgatgcgtcgctatattcagtatctgatcgacgtcctcgaggcc
catggcgtggaggtcgaaaatcgacatcctccttgcataggccccatcaatccatttaac
gaagctcgccgactagaagctctacaagaagcggcaagggatgcttacagagctggaaaa
cgcaatccacaactgatctgcgttatacttccgggcaaggatgcatggctgtatgaagcc
atcaaaaagagctcatttgtggatctgaaagctccagtgccaactcagtgcatgcaagct
gcgaagatccgtactcatcgtggtatcgaagcgtacactgaaaatttggtgatgaagatt
caaagcaagctgggtgggatcactcaccgtattcctttcaatcaacttcccggcatggtg
catggtagaacgatgttacttggtgctgatgttggtcatccaccaatcaaacccggctta
gacaacgctccttccgttgcctgctcgatcgcgaccacaaatccggattgcgatgcgttc
acgccccaaattcgtcttcaacgaggacgcggcgagatcatttgtgatctcgccgatatg
gtagtgaaccacctgcgcatcttcaaggacagaaacggagaatatcctgaacgtattctg
atcttccgcgatggggtctctgaagggcagtatgcggcgactctccagtacgaacatcac
gccgtacatcaagcatgcgagcgtcttcaacgtgggtatcgcgctcgtattttggtctgc
atctgtgcgaagcgtcataatacccgattctttggcagcgagctggatatcgacaagacc
ggcaaccttccgagtggactggtggtggaccgttcggtaacacatccatttgtcttcgac
tttttcctccaagctcattcgtcacgagctggtacggctcgacccacccactacgtctgt
ctcttggacgaactcggcatgacccccgatgaattgcaacaactcgtatacaatctctgt
cattcattcagtcgatgcaccaagagcgtgtcactcgtacccgtttgctacatcgccgac
cttgtatgtcagaaggctaggattatagtgcatgaacgcggcggttcgacgacagctccg
tccgagtcatctggg
DBGET
integrated database retrieval system