Tremella mesenterica: TREMEDRAFT_12962
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Entry
TREMEDRAFT_12962 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K03509
DNA polymerase eta [EC:
2.7.7.7
]
Organism
tms
Tremella mesenterica
Pathway
tms03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
TREMEDRAFT_12962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tms03400
]
TREMEDRAFT_12962
Enzymes [BR:
tms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TREMEDRAFT_12962
DNA repair and recombination proteins [BR:
tms03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
TREMEDRAFT_12962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
POLH-Rev1_HhH
IMS_C
zf_UBZ
IMS_HHH_1
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
18491056
NCBI-ProteinID:
XP_007006652
JGI:
Treme1_12962
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
PTYRHVLSSASMTVLTIAHCDIDAAYAQFEQVRLGLPDDIPLICAQWQSIIAVNYPARKY
GIKRFNTIDEAKKMCPHLVVQHVATYRNGEAEAGYWGEVDPRTHKVSLDPYRRESLKILA
IFKEMVPRGEIEKASIDEAFLDLTTQVLERLLERFPYLSQVPPDAPEGLDSALPTAPPVN
WQNSGNVFPIDGETDPALGIEEPDGSQEPEGKWEDWALCIGAEIMSELRAEVYKRLHYTC
SAGIAHNKAMAKLCSAWKKPNNQTVLRIAATPAFLRNMDFTDIRFLGGKLGNAIATEYGA
KTVGDMLTVPLDELQRRFGEESVWVYNIIRGIDHTEVKERVTTKSMLASKNTRPAVTTPA
QGLHWIQVLSGELNVRLREAREVSPGLWPKTLVLSHRTGGEASRSRQTPFPFTRDLSTEY
IVKYASKLWAEVCQPMEHGSMKVNNMALAFNGLEKLEDGQKGIEGFFSNPSNLKRPHERL
RSKSPHPPSEEAQTSTSTPPPKGESPMKKPRLPTLHTGKEKRKTVLETFLRNSTNSPSLS
EVTKVDADPPDVVSDIVVGTAEQEDAETWSCPRCKERFTLSRFGSMEGEDVVDVEERNKR
MREVQQEHEDYHFAKDLQEGVEPRRAPVAQVKRKAEGIKAFFRPR
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
cctacttacagacatgtcctcagttcggcatctatgacagtattaactatagctcattgt
gatatagatgctgcttatgctcaattcgaacaagttcggcttggtttacctgatgacata
cctttgatatgtgcgcaatggcagagtattatagctgttaattatcctgcgaggaaatat
ggtattaaacgattcaacaccattgacgaagccaagaaaatgtgccctcatttagtagtt
caacacgttgctacgtatcggaacggggaagctgaagctggttattggggtgaagttgac
cctcggacgcacaaggtgtcattagatccgtatcgccgagaaagtttgaaaatcttggcc
atcttcaaagagatggtacctcgaggagagattgaaaaagcctcgatcgacgaagctttc
ttggatctcactacccaagtcctcgaacgtctactagaacgtttcccctatctctcccaa
gtccctccagatgcgccggaaggactcgactcggcccttcctaccgcaccaccggtcaat
tggcagaactctggcaacgtttttcctatcgacggtgagactgatcccgcgttaggaata
gaggaaccggacgggtcgcaagagccggaaggaaagtgggaagattgggcactttgtatc
ggcgctgagatcatgtcggagcttcgtgcagaggtgtataaacgattacattacacatgc
tcagctggcatagcacataataaagctatggcaaagttgtgctcggcgtggaaaaaaccg
aataatcaaactgtcctgcgcatagctgcgaccccggctttcctacgaaatatggacttt
acagatatccgttttttgggcggtaaattaggaaatgcgatcgcgactgaatacggggcc
aagactgtcggcgatatgctgacagtccccttggacgaattacaacggagatttggagaa
gagagcgtttgggtctataacatcatcagggggattgaccacaccgaggtcaaagaacgc
gtgacaaccaaatcgatgttagcaagcaaaaacacccgtccggcagtgacgacccccgct
caaggattacattggatccaagtcctctctggtgaactcaacgtgagattacgagaagct
cgagaggtatctccaggtctatggcccaaaactctggttctgtcacatcgtacgggtggt
gaagcaagtcgatctcgtcaaactccttttcctttcacaagggatttgtcgacagagtat
atagtcaagtacgccagtaagctatgggcggaagtatgtcaacctatggaacatgggagt
atgaaggtgaacaatatggctttagctttcaacggtttagaaaaacttgaagatggtcaa
aaaggaatcgaagggtttttctccaatccatctaatctgaaacgtccacacgaacgtcta
cgatccaaatcgcctcatccgccatctgaagaagctcagacgtccacatcgacaccaccg
ccgaagggagaatcaccgatgaagaaacctcgattaccaacgttacacactgggaaagaa
aaacgaaagacggtgttggagacattcctaagaaactcgactaactccccttccttatcg
gaagtaacaaaagtcgatgcggacccaccagacgtggtgtcagacatcgtggtcggcaca
gcagagcaggaagacgcagagacatggtcttgtcctcgatgtaaggaaaggttcacactt
tcacgctttgggtcgatggaaggggaggatgtcgttgatgtagaagaaagaaataagagg
atgagagaggttcagcaagaacatgaagattatcattttgccaaagaccttcaagaaggg
gttgaacctcgacgagctcctgtagcacaggttaaacggaaagcagaaggtatcaaagct
ttctttcgacctaga
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