Tremella mesenterica: TREMEDRAFT_13947
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Entry
TREMEDRAFT_13947 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K12822
RNA-binding protein 25
Organism
tms
Tremella mesenterica
Pathway
tms03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TREMEDRAFT_13947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tms03041
]
TREMEDRAFT_13947
Spliceosome [BR:
tms03041
]
Complex A
U1 snRNP components
U1 related factors
TREMEDRAFT_13947
Complex B
TREMEDRAFT_13947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PWI
Herpes_UL17
Motif
Other DBs
NCBI-GeneID:
18491075
NCBI-ProteinID:
XP_007000407
JGI:
Treme1_13947
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
KTTSVFVGSIAPGITDETLKELLNACGPLHELKRVVGATGKPQAFGFASFESPEVVMRCL
RCLNGVELPDMSPEGRQQGKPPKALLVKVDEKTREFLDEFEATLGRSDDDEAEDAISRKA
ISHIVALLTDPNAVRPEGLPEPAGNKSPLNVVVPAHLQDLKEGDLPEEQRVAVLDQIAIF
RENAARREREKKRLEEEKERFKAVQPREGPTGPRGPAAQQQPGPSAYGYDPQGYQDPVAF
VKPQSAQGKDVSDRTDEEEEEIRRKRRKQEADALMRDRERQVESRERLRVERYNREMGQR
RQYTDTVERMRRRLQGIYDNWDDDERGARDDVFYVDRQRWRLQRQSARLREYQEDVRDRN
VEADEMAALEKESEEFLKKQMEEFASMEQDKRNAGLLSEDAAPIRLALNRVPMPEPKEEK
PKVVSRPVPQSVFGEGDEEEQAVRKKQRTLVKLEYDGAEDTGLTEAEQAAKRTARLLEIR
ERLPHERRRLFGFEVEWAALTETLLQGKILNLVKEKMRHFLGEVDDDLVDFVLEHLRARK
GPNSLIEGIEPVFAEEAPPFVHDLWRQIIFESAAYVAGVESGTMQV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
aagacgacttcggtattcgtagggagtatcgccccaggtatcactgacgaaacgttgaaa
gagctgctcaatgcatgcggacctttacacgagctaaaaagggttgtcggagccactgga
aaacctcaagcatttggctttgcgtcgtttgaaagtcctgaagtggtcatgagatgcttg
aggtgtttaaacggcgtagagctacctgacatgagtcccgaaggtcgtcagcaagggaag
ccccctaaagccctattagtgaaagtggatgaaaaaacccgcgaattcttggacgaattt
gaagcaactctaggaaggtctgatgacgatgaagctgaagacgctatcagtcgaaaggcc
atctctcatatcgtcgcgctccttactgaccccaatgccgttcgtcccgaaggtctcccc
gagccagccggcaataagtcacctctcaatgtggtggtgcctgctcatttgcaagatttg
aaggaaggcgatcttcccgaggaacaacgtgtagctgtgctcgatcagatcgccattttt
cgagagaatgcggcaaggagggaacgagagaagaaacgattggaagaagagaaggaacgc
ttcaaagctgtacagccacgtgaaggaccgactggaccaagaggtcctgccgctcaacaa
caaccaggtcccagcgcttacggctatgatccgcagggatatcaagacccggtagctttc
gtcaagccgcagtcggcgcaggggaaggatgtgagtgatagaacggatgaagaggaagag
gagattagacgaaagaggcgtaagcaagaagcagatgctctcatgagagatcgggaacga
caagtagagtctcgcgaaagattacgagttgaaaggtataaccgcgaaatgggtcaaagg
cgtcaatacacggatacagttgagcggatgaggaggagactgcaaggtatatatgataat
tgggacgatgatgaacgcggtgctcgagatgatgtgttctacgttgatcgtcaacgatgg
agactacaaagacaatctgcgcggttacgggagtatcaagaagacgtccgtgataggaat
gtcgaagcggatgaaatggcagctttggaaaaggaatctgaagagtttctcaagaaacaa
atggaagagtttgcctcgatggaacaagacaaacgcaatgctggtcttctctctgaagat
gctgctcctatccgtctggctctcaaccgtgttcccatgcccgaacccaaagaagaaaag
cccaaagtcgtttctcgacctgtgcctcagtctgtattcggtgaaggagatgaggaagaa
caagccgtgcgaaagaaacagagaactctggtgaagttggagtatgacggcgcggaggat
acaggtctgacggaagctgagcaagctgcgaaacgtacggcaaggctacttgagatccga
gagagattacctcatgagagaagaagactcttcgggttcgaagtggagtgggctgctctc
acagagacattgttacaaggcaaaattctgaatttggtgaaagagaagatgagacatttc
ctcggggaggttgacgatgatttggtcgactttgtgttggaacatctcagagcgagaaag
ggtccaaatagtctcatcgagggaattgagccggtgttcgctgaagaagctcctccattc
gtacatgatctctggcgacagatcatctttgaaagcgccgcctacgtcgctggcgtggaa
tcagggaccatgcaagtt
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