Tremella mesenterica: TREMEDRAFT_13987
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Entry
TREMEDRAFT_13987 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tms
Tremella mesenterica
Pathway
tms03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TREMEDRAFT_13987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tms03041
]
TREMEDRAFT_13987
Spliceosome [BR:
tms03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
TREMEDRAFT_13987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
18491077
NCBI-ProteinID:
XP_007004880
JGI:
Treme1_13987
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
PSSSSSDQPDPKKTKTESFDIASIRAQIAARKAQVEAQVSSRPSDSPHPPSLPSKPIQTN
NKIAAAKRRIEEMNAKMSNPYLGGVKPIEQKPQATGGLHPLLMETTNSAVGGKAGAGGIG
EGVIGGEEKNEKKALRDRYKTMAPKYTSVKANASISSSSNIPRPNPVIPVLNPYATKTDT
LAPEEEKAVIRKSKKLQFSQAGRYVKQGDALRSEIKMDELRQRIAEASKKAGLDSEFDTL
ERSLKRAPPPDVEWWDQAILPEGATYEDIDSALEWITTSNESLVTHLVQHPIPIPAPGEK
KQPERGLMLTKREQKKMRRQRRQAELEDKRDRQKMGLLPPDPPKVRLANLMKVLTSAAIQ
DPTKVEAKVRKEVAMRALKHQKDNESRKLTPEQRKEKEYQKLVSKERTGLYCAVFKIKYL
TNGRHKFKVRETAKTDLLSGVCIFGPYYAIVLVEGVDKSIKHYKRMMLHRIDWTEQARPL
GDEGEDDDEDGGKMGGGQEDPDSLADNKCELIWEGEVPERTFRIFRARHAESDSKAKEWL
TPKWEGMWDVAKRLVWSGEDV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
ccttcatcttcctcgtcagatcaaccagatcccaaaaagaccaagacagagtctttcgac
atagcttccatccgtgctcaaatcgccgctcgaaaagctcaagtagaagctcaagtttct
tcccgtccatccgactctccccatcctccttctctcccttcaaaaccaatacaaaccaac
aataaaatcgcagctgctaaacgacgaatagaagagatgaacgctaaaatgtccaatccg
tatttaggtggtgtgaaacctatcgaacagaaacctcaagctacaggaggtttacatcct
ctccttatggaaactacaaattcagctgtcggtgggaaagctggggctgggggaatagga
gaaggagtaattggaggagaagagaaaaatgagaaaaaagctttaagagatagatataaa
actatggctcctaaatatacttctgtaaaagctaatgcttctatttcatcttcttcaaat
atcccaagacctaatcctgtcatacctgttttaaacccttatgctacaaagaccgatacg
ttagcaccggaagaagaaaaggcagttataaggaaatcgaagaaattacaattttctcaa
gctggtagatatgtgaaacaaggtgatgcattaagaagtgagattaagatggatgaattg
agacagaggatagcggaagctagtaagaaagctgggttggatagtgagtttgatactttg
gagaggagtttgaagcgggcacctcctccagatgtggaatggtgggatcaagctatactc
cccgaaggagcgacatacgaagatattgattccgcattggaatggataaccacctcgaat
gaatccctcgtcactcacttggttcaacatccgattcctatacctgctccaggggaaaag
aaacaaccagaacgaggtctcatgttgaccaaaagagaacaaaagaaaatgcgtagacaa
agacgtcaagcagagttagaggataaacgtgatagacaaaaaatgggtcttttgccacct
gatccaccgaaagtgcgattggccaatctgatgaaggtcttgacaagtgcagctatacaa
gatccgacaaaggtagaagcgaaagtcaggaaagaagttgccatgagagctttgaaacat
cagaaagataatgagtctaggaagttgacacctgaacagaggaaggagaaagagtatcag
aaattggtttcgaaagagaggacgggattgtattgtgctgttttcaaaatcaaatacctc
accaatggaagacataaattcaaagttcgtgaaactgctaaaactgaccttctctccggt
gtatgcatcttcggtccttattacgctatcgtcctggtcgaaggggtggataaaagtatc
aaacattataaacgtatgatgttacatcgtatcgattggaccgaacaagctcgtccgtta
ggtgatgaaggtgaggatgatgatgaagatggaggtaagatgggagggggacaggaagat
ccggatagtttggctgataataaatgcgaattgatctgggaaggtgaagtgccagagaga
acttttaggatcttcagagctagacatgcggaatcggattcgaaagcgaaagaatggttg
acaccgaagtgggagggaatgtgggatgtggcgaaaaggttggtttggtctggggaagat
gtg
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