Tremella mesenterica: TREMEDRAFT_14959
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Entry
TREMEDRAFT_14959 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K11883
RNA-binding protein NOB1
Organism
tms
Tremella mesenterica
Pathway
tms03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TREMEDRAFT_14959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_14959
03051 Proteasome [BR:
tms03051
]
TREMEDRAFT_14959
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
TREMEDRAFT_14959
Proteasome [BR:
tms03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
TREMEDRAFT_14959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_NOB1
PIN_6
DZR
Motif
Other DBs
NCBI-GeneID:
18491096
NCBI-ProteinID:
XP_007005961
JGI:
Treme1_14959
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
VKHLVLDAGPFLSFTPLRHLAQRLYTTPQVVAELRDPRSREHFQNLGLQGVDVKVESPRS
DALARVIEFSKKTGDYAVLSQTDLGVVALTLQYELMENGEANVRTELEGSEESSDDGEEP
GKEGKRIESGGETEEIKRVDVEELSSPLSEVDAEHQVSEASITLQRISLKPEVTDLSSGD
AGQIDTLASSQVVEDDEESGGEWITPSTLNKHRSHDLGLTTGGDDSDRPLAAACMTGDYA
VQNVLLGMGLGLVGDEGKRISKVRSWVLRCHACFKICRDPSKRFCPSCGNATLLRTTITT
SASGKQRIHLKRNFQYHLRGTKYSIPDSKPGRAKGQQKGGSGLILREDQGEWLDALKTQQ
WQKAKEEKKIAKGVLEGWNDPDWLPDILTVGNSGKGRNGPGGMPTIGHGRKNPNQARRKR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtcaagcacctcgtcctcgatgccgggccttttctctctttcactccactccgacatctc
gcccagcgtttatataccacccctcaagtagtcgctgaactccgtgatccaagatcaagg
gaacattttcagaatttaggcttacaaggtgtcgacgtcaaggtggaatcaccgaggtcg
gatgcactcgctcgagtcatagaattctcaaagaagacgggagactatgccgtgctatct
cagactgatctgggggtggtggctttaactctgcagtatgagttgatggagaatggtgaa
gccaacgtacggaccgaacttgaaggctcagaagagtcctctgatgatggggaagagccg
gggaaggaaggaaagaggattgaatctggaggtgagactgaagagatcaaacgtgtcgac
gtggaagaacttagtagtcctctcagcgaggtcgatgcggaacatcaggtgtcagaagca
tctatcacacttcaacggatatccttgaaacccgaagtaaccgacctgtcgtctggagat
gcgggtcagatagacacgctggcctcgtcccaggtcgtggaggacgacgaagaatctgga
ggcgaatggatcaccccatccaccctcaacaaacatcgctcacacgatctcggtctcact
acaggaggagatgattcggatcgaccacttgcggcagcgtgtatgacgggagattatgct
gttcagaatgtattgctaggaatgggtctgggccttgtcggggatgaaggaaagaggatt
tcgaaagttcgtagttgggtcttgaggtgtcatgcttgtttcaagatttgccgggaccct
agtaaacgattctgcccttcatgtggtaacgcaacactactccgaactacgatcaccact
tctgcctccggcaagcagcgcatccacctgaagagaaatttccagtatcatctacgaggc
acaaaatactctattcctgattccaagccgggcagagccaaaggacaacagaaaggaggg
tcaggattgattttgagagaagatcaaggagagtggctagatgctttgaagacacagcaa
tggcagaaagctaaggaagagaagaagatagccaagggagtgttggaaggttggaacgat
cctgattggttacctgacatcctcactgtgggtaattccggaaaggggcgaaatggacct
ggtgggatgcccaccataggtcatgggagaaagaatcctaatcaagccaggcgaaagaga
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