KEGG   Tremella mesenterica: TREMEDRAFT_15463
Entry
TREMEDRAFT_15463  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
tms  Tremella mesenterica
Pathway
tms03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TREMEDRAFT_15463
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tms03400]
    TREMEDRAFT_15463
Enzymes [BR:tms01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     TREMEDRAFT_15463
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     TREMEDRAFT_15463
DNA repair and recombination proteins [BR:tms03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     TREMEDRAFT_15463
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH NFACT_N Fpg-like_C
Other DBs
NCBI-GeneID: 18491103
NCBI-ProteinID: XP_007004883
JGI: Treme1_15463
LinkDB
Position
Unknown
AA seq 339 aa
ECIEVERARKLIYDTCRGYKIKHVDSLEDKIVYTGGTTHDEFAREITGRTITGCERKGKT
FWLTLSGKGRFPVMHFGMTGMIQQLKGQEPNWYRRRRKESPTTWPPRFYKFVLDLEPQAG
SVSDEPRELAFIDGARLGRLRLIPHPVIHHPPVSLLGFDPVLSMPSLEEFQKLLLKKKGT
VKGVIMDQAFSAGVGNWVADEILYQAHIHPSCPIPHLSEKDVENLHQWIRKVPLMAVEVN
ADSLQFPDNWLFRWRWGKGKKVKVAKGRKVKEESVEGGQPPGTEDVKPKDVEFLALPNGK
PATIEFIEVGGRTTALVKELQKMPDGVDIKPKISKGKRK
NT seq 1017 nt   +upstreamnt  +downstreamnt
gaatgtatagaggtagaacgtgctcgaaagcttatatacgatacgtgccgtgggtacaag
attaaacatgtcgatagtctagaggacaagatcgtgtatacgggtggtactacacatgat
gagtttgcaagagaaatcaccggacgtaccatcacaggttgcgagcgcaaaggaaagacc
ttctggttgactctgtctggaaagggaagattcccagtgatgcatttcggaatgaccgga
atgattcaacagcttaaaggacaagaacccaattggtatcgtcgtagacgtaaagaatcc
ccgactacttggcccccaagattttacaaattcgtattggacttagagcctcaagcagga
tcagtatccgatgaacctcgagaactggctttcatcgatggtgcaagattaggtagattg
agactgatccctcatcccgtaatccatcatccgcctgtatctcttttagggttcgatccg
gtgttgtctatgccatcattggaagagttccaaaagttgttattgaagaaaaaagggact
gtaaaaggtgtcataatggatcaagcgtttagtgccggagtgggaaattgggtagcagac
gagatcctgtatcaagctcatattcacccctcctgtcccatccctcatctctcagagaaa
gacgttgaaaatctgcaccaatggatccgaaaagtccccctcatggccgtagaggtcaat
gcggattctctacaatttccagacaattggctcttccgatggagatggggtaagggcaaa
aaggtcaaagttgccaaaggaaggaaagtcaaggaagagagtgttgaaggtggtcaacca
ccaggaacggaagatgtcaaaccgaaagatgtagagtttttagctttgccaaatggtaag
ccagcaacgatagagttcattgaggtaggtggtcgtaccactgctttagtcaaagaactc
caaaagatgccagacggggtagatatcaaacctaagatcagtaagggtaaacgcaag

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