KEGG   Tremella mesenterica: TREMEDRAFT_19213
Entry
TREMEDRAFT_19213  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K03134  transcription initiation factor TFIID subunit 10
Organism
tms  Tremella mesenterica
Pathway
tms03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    TREMEDRAFT_19213
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tms03021]
    TREMEDRAFT_19213
   03036 Chromosome and associated proteins [BR:tms03036]
    TREMEDRAFT_19213
Transcription machinery [BR:tms03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     TREMEDRAFT_19213
   Coactivators
    SAGA/TFTC/STAGA complex
     TREMEDRAFT_19213
Chromosome and associated proteins [BR:tms03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     TREMEDRAFT_19213
    STAGA complex
     TREMEDRAFT_19213
    TFTC complex
     TREMEDRAFT_19213
    SAGA complex
     TREMEDRAFT_19213
    SLIK complex
     TREMEDRAFT_19213
SSDB
Motif
Pfam: TAF10 Bromo_TP TAF4
Other DBs
NCBI-GeneID: 18491210
NCBI-ProteinID: XP_007006960
JGI: Treme1_19213
LinkDB
Position
Unknown
AA seq 117 aa
RREEEMARRNRSLAEFLVMLDKYKPLIPEEVTEYYLQKAGFECTDPRLKRLLSLSAQKFV
SDLARDALHFAKLRVNGTAVGRGRPASGVDKNRIVLTMDDLSQALGEHGVDLKKPDY
NT seq 351 nt   +upstreamnt  +downstreamnt
aggagagaagaagaaatggctaggaggaatagaagtttggcagaatttttagtcatgttg
gataaatataaaccattgataccagaagaagtgacggaatattacctacaaaaagcaggt
ttcgaatgtacagatccgagattaaaaagattactctcattatcagcacagaaattcgtt
tctgatctcgcgagggatgctctgcatttcgcaaagttacgtgtgaatgggacggctgta
ggaagaggacgtcccgcttcgggtgtagacaagaatagaatagtcctaacgatggatgac
ctttcacaagctttaggtgaacatggtgttgatctcaaaaaaccagattac

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