Tremella mesenterica: TREMEDRAFT_24631
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Entry
TREMEDRAFT_24631 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tms
Tremella mesenterica
Pathway
tms03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TREMEDRAFT_24631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_24631
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
Pre-60S particles
RNases
TREMEDRAFT_24631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
18491391
NCBI-ProteinID:
XP_007000525
JGI:
Treme1_24631
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MFSSLGLFNNVPCPDSSCHRPNCVFSHQSQAGPSRSSPSKRPVATPAETNEVGRATKRKS
DSTLIPSEIKKAKQVFSAIHSPQTVVATPHKPISPIKSSTSTSTQNSKLSGGVPILPTDT
GQAPKLPLFRRTPQPYADRQKGLQTLFAQFNKLYVQILRQSPKLAQESALAQEEEVSSTS
TNLAAYKRSIHHAAVSISRRPIPTTIPHPSIGTIKVSREAYEQAEKASTSRLTRERIIKY
CLSHEEMIKWNYPNSTDMSLTSDENLEPSAEGTEKICDRCKMSFVVDGKNLKERFGECKY
HHGRTAPQRVEGRRKWIYSCCGRERGEAGCEEGLHVFSEKEDDGKLAKRVPFKTVKQVLE
SMPRKGEVETQGWVDVVGMDCEMISTTAGISLARVTIIDENGLTLLDELVRQTVTVLDLN
SRFSGIKPGELDEAVMDLPAVRSACCAFIGPETIIVGHGLENDLRALRLLHDKIIDTAIV
FPHDKGHPFRRALRDIVKEKLGVFIQDRTADLGHSSAVDAKATLDLLKWQVRDDHSS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgttctcttcactcgggctgttcaacaatgtcccatgtcctgattcatcgtgtcatcgg
cccaactgcgtgttttcacatcaaagtcaagcaggaccatctcgctcgtcaccctccaag
cgacctgtagcaactccggcagaaacgaacgaagtaggcagagcgacgaagaggaaatca
gactcgaccttgatccctagtgagatcaagaaagcgaaacaggtcttcagtgctatacac
tccccgcaaacagtagtcgcaaccccccacaaacctatctccccaatcaagtcatctact
agtacgagtactcaaaattcaaaactcagtggaggtgttcccatactccctacggacact
ggacaagctccgaaattacccctgtttcgacgaaccccgcagccttacgcagacagacag
aagggtttacaaactctcttcgctcagttcaataagctgtacgtccaaattctacgacaa
tcaccaaaacttgctcaagagtcggcattagcacaagaagaagaagtctcatccacttcc
accaacctcgccgcttacaaaagatccatccatcatgccgcagttagtatctcccgtaga
cccatccccactaccatccctcatccatccatcggtactatcaaagtctctcgagaggca
tacgaacaagcagaaaaagcttccaccagtcgtctcaccagagaaaggataataaagtat
tgtctttcccatgaagagatgatcaagtggaattatccaaattcaacggatatgtctctc
acttctgacgaaaatcttgaaccatcggcagaggggacagagaagatatgtgataggtgt
aaaatgtcttttgtggtagatggaaagaatttgaaagaaaggtttggagaatgtaagtat
catcatggaaggacagcgccacagcgagtggaaggaaggaggaaatggatttattcatgt
tgtggaagagaaagaggagaagctggatgtgaagagggtttacatgtgtttagtgagaaa
gaagatgatggaaagttggcaaagagagtacctttcaagactgtcaaacaggtgctagag
agtatgcctcggaagggcgaagttgagacacaagggtgggttgatgtggtaggaatggat
tgtgagatgattagcaccaccgccggaatatctttagcaagagtgaccataatcgacgaa
aacggactaacactactggatgaactcgtccgacagacagtcaccgtcttagatctcaac
tcgcgattctcaggaataaaaccaggagagctcgacgaagctgttatggaccttccggca
gttcgatcagcttgttgtgctttcataggaccggagactatcattgtaggccacgggttg
gaaaatgatcttcgggctcttcgtctcctacatgataaaatcatcgatacggccatcgta
ttcccacatgataaaggtcatccttttcgtcgtgcactaagagatattgtgaaggagaaa
ttgggagtgtttatccaagatcgaacggccgacttgggacatagttcagctgtggatgcg
aaggcaactttggatttgttaaaatggcaagttcgggatgatcattcgtcttag
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integrated database retrieval system