Tremella mesenterica: TREMEDRAFT_24652
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Entry
TREMEDRAFT_24652 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K12183
ESCRT-I complex subunit TSG101
Organism
tms
Tremella mesenterica
Pathway
tms03250
Viral life cycle - HIV-1
tms03272
Virion - Hepatitis viruses
tms04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
TREMEDRAFT_24652
03272 Virion - Hepatitis viruses
TREMEDRAFT_24652
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
TREMEDRAFT_24652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_24652
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tms04147
]
TREMEDRAFT_24652
Membrane trafficking [BR:
tms04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
TREMEDRAFT_24652
Exosome [BR:
tms04147
]
Exosomal proteins
Proteins found in most exosomes
TREMEDRAFT_24652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
JIP_LZII
Motif
Other DBs
NCBI-GeneID:
18491393
NCBI-ProteinID:
XP_007000527
JGI:
Treme1_24652
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MSSLDLTNQWLRTVLQPYPSRERILPEVMDVLAQWRTLSVKTEAFTFDTGHTALLLLLHG
TLPITYRGATYQIPIHIWVPTEYPRAPPLVFVVPTAEMGIRKSHEVEPGGRVRDIVVEEW
WGSWEIKTIGVLLRHLTDLFSLTPPVYARPPDQPKSPSIATPHRPSSAAGPAAGPSVMTL
PSYKPSTNPSAGQYTPQSPIRQSFIPFSPQSPQSPPVPQRPHAGPSRNDSLPSQMSGPSQ
QSFMPNINPPLASSPQPQHPAFSGQSIAAHILEPLRHHTPPIPPRGFTPAHPQINTHSPD
HSSQVYHPHDTPPPTVPSHPQHSPPAHSVPTRKPIADLLSSPLSSTTALPSDSAEKTAPP
PLPPSKPPPPSLLHLHSILLPHLNASLPPLIQSLQTNRNHLLERREDLTSGEPAIRDEMA
RLLAVKKVCDSTGRKMEDVVARAEERVADLEQRGEVSVDELVCGISIVHNQLIDLVAEDN
AIEDTIYHLTRALDAERIDLDRFLKSIRSLAREQYMKRALVERILTGMGQKQDW
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccttgatctcactaaccaatggctgagaaccgtccttcagccatacccttcc
cgagaacgtattctacccgaggtcatggacgttctcgctcagtggcgtactctcagtgtc
aagaccgaagctttcacatttgacactggtcatacagccctacttcttctgttacacggt
acacttcccatcacctatcgaggggcgacttatcaaatccccattcacatctgggtaccg
accgagtatcctcgcgcacctcccttggtgtttgtcgtaccgacggccgagatgggtatc
aggaaatctcatgaggtggaacctggaggaagggtcagggatatcgttgtggaagagtgg
tggggatcttgggagatcaagaccattggagttcttctacgacatttgaccgatttgttc
tctcttacaccaccggtatatgctcgaccaccagatcagccaaagagtccatcaatagcc
acccctcaccgaccttcttctgccgccggacccgcggctggaccctcagtgatgacacta
ccttcatataaaccctccacgaatccctcagcaggacaatatacacctcaatcgcctatc
cggcaaagtttcatcccattcagtcctcagtctccccaatctccaccagttcctcaaaga
ccacacgctggaccatcacggaatgatagcctgcccagtcaaatgtctggtccatctcag
cagtccttcatgcccaatatcaatcctcccctagcttcatctcctcaacctcagcatccc
gcattttctggacaaagcatagcagctcatattctggagccattacgacatcacactccg
cctattccaccacgaggcttcacacctgctcatcctcaaataaacacccactcacccgat
cattcatctcaagtttaccatcctcatgatacacctccacctactgtaccttcgcatccc
caacattcaccgcccgcacattccgtaccaactcgaaagcccatagctgatcttctttcc
tccccgttgtcatccacgactgcacttccgtcagattcagcggagaagaccgcacctccc
cctcttcccccgtctaaaccaccgcctccgtctctcctccatctccattcgatcctcttg
ccccatctcaatgcatcactccctcctctcattcaatctttgcagacaaatcggaatcac
ttactggaacgtcgagaagatttaacctctggggaaccggcgattcgggacgaaatggct
cgcctactagccgtaaaaaaggtgtgcgactcgactggtcggaagatggaggatgtggtc
gctcgagcagaggagcgagttgcagatctagagcaaaggggggaggttagcgtcgatgaa
ctggtctgtgggattagcatagtgcacaatcaacttattgatctggtggcggaagacaat
gctatcgaggacacaatctatcatttgaccagagccttagatgcggaacgtatcgacttg
gatcgatttctcaaatctatcagatccctagcaagggagcaatacatgaaacgggccctc
gttgagcgtatcttgacagggatgggacagaaacaagattggtga
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integrated database retrieval system
