KEGG   Tremella mesenterica: TREMEDRAFT_24902
Entry
TREMEDRAFT_24902  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
tms  Tremella mesenterica
Pathway
tms03082  ATP-dependent chromatin remodeling
tms03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    TREMEDRAFT_24902
   03083 Polycomb repressive complex
    TREMEDRAFT_24902
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tms03036]
    TREMEDRAFT_24902
Enzymes [BR:tms01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     TREMEDRAFT_24902
Chromosome and associated proteins [BR:tms03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     TREMEDRAFT_24902
   HDAC complexes
    Sin3A-HDAC complex
     TREMEDRAFT_24902
    BRAF-HDAC complex
     TREMEDRAFT_24902
    REST complex
     TREMEDRAFT_24902
    SHIP complex
     TREMEDRAFT_24902
    MiDAC complex
     TREMEDRAFT_24902
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     TREMEDRAFT_24902
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    TREMEDRAFT_24902
  Chromatin remodeling factors
   NuRD complex
    TREMEDRAFT_24902
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 18491422
NCBI-ProteinID: XP_007000556
JGI: Treme1_24902
LinkDB
Position
Unknown
AA seq 358 aa
MTRFHTDEYIELLEMVNPDNAEILTGGGTRCLIGEDCPPFEGVFEFCTISAGGSISAAER
INSGHADIAINWAGGLHHAKKNEASGFCYVNDIVLAILELLRIHTRVLYIDVDVHHGDGV
EEAFYTTDRVMTASFHRFGEFFPGTGDVRDVGMGRGKGYAVNVPLRDGITNESFHYIFKP
VSSFIIQHIIDWFRPGAVVLQMGADSLSGDKLGGFNLTLDGHAECARFVKSFNIPTIMLG
GGGYTTKNVARAWTNETAVMCGRELPLDLPYNQYMEYYGPRYKLEVLPNNTDDHNPTTYL
DNIKKSVIEHLRSLPHAPAAQMKSRSSRGVGDVLGLKKDELSDPEDEIEATVKSAYLS
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgacaaggtttcatacagacgagtacatcgagctgttggaaatggtcaatccggacaat
gccgagattttgactggcgggggtacaagatgcctaataggggaagattgtccacctttc
gaaggggttttcgaattttgcaccatctcggccggaggttctatcagtgctgctgaacga
atcaattctggccacgcagatattgccatcaattgggccggaggacttcatcacgccaag
aagaacgaagcaagtggattctgttatgtgaacgacattgtactcgccatcttggaactg
cttcgtatacacacgcgagtgctgtatatcgacgtagacgtacatcatggcgatggggtc
gaagaagcattctacaccaccgaccgtgtcatgaccgctagttttcatcgatttggagag
ttttttccaggaacgggagatgtcagagatgttggaatgggtcgcgggaaaggatatgca
gtcaatgtccctttgagagacggtatcacgaacgaatcattccattacatcttcaaaccg
gtcagctctttcatcatacagcacatcatcgattggttccgacccggtgcggtggttttg
cagatgggtgcggattccctgtctggtgacaagctcggtggattcaatctaacattggac
ggtcatgctgagtgcgcccgttttgtgaagagcttcaatatccccactatcatgcttggc
ggtggtgggtacacaacgaagaatgtcgcacgagcatggaccaacgaaacggccgtcatg
tgcggtcgtgagcttcctctagacttgccgtacaatcaatacatggagtattacggaccg
aggtacaaacttgaggttctgccgaataatacagacgatcacaatcctaccacctacctg
gacaatatcaagaaatctgtgattgagcatctgagatctctaccccacgctccggctgct
cagatgaaaagtcgatccagtcgtggtgtgggggatgtcctcggactgaagaaagacgag
ctttcagatccggaagatgagattgaggcgacagtcaaaagtgcgtatctatcctaa

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