KEGG   Tremella mesenterica: TREMEDRAFT_25597
Entry
TREMEDRAFT_25597  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
tms  Tremella mesenterica
Pathway
tms03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    TREMEDRAFT_25597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tms03021]
    TREMEDRAFT_25597
Transcription machinery [BR:tms03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     TREMEDRAFT_25597
 Prokaryotic type
  Archaeal type
    TFE
     TREMEDRAFT_25597
SSDB
Motif
Pfam: TFIIE_alpha TFIIE-A_C ADK_lid
Other DBs
NCBI-GeneID: 18491514
NCBI-ProteinID: XP_007000648
JGI: Treme1_25597
LinkDB
Position
Unknown
AA seq 420 aa
MSAPSADEVLGLCHNLVYQVAYAFYDAPYIILLRLMVHLGVSTEKRLAEICQLSPQELRK
YMGMLLVHRLVKRHVGKEKAPVDHRRTDFDPEEKMRIRDVIYWYLDYREFANVTKYRLAV
MRRSIDDKVKNEVGVRGYLCTSCGRTYDPLDLGHLFDPQTNVFRCETCSEELVEHDPSQD
DTTGDKVDRMGQFNLATAPIRDALKSLEGMTLPSVNIVAWMAQNVKSDLPVQATEGREEE
KKVQIVLGSGGERERLEAERAAEAQRVQTSLPVWHTQSTITGQSTSLGLAAERKASGPHL
AVSRNTDGGVDDLEEHYANLAGASGESFPLVKQEEEDEDEDDFLPSSQPGEPDEGGPSGE
DQAKMIMVKGVPKPLGEITEEDEAHMTPEEYQVGRHLYKCHQLIIRHTTKQYPNIPHAYI
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgtcagctccctcagctgatgaagttctgggtctttgtcataacttggtttatcaggtc
gcttacgcgttctacgatgcgccttatatcatcctcttgcggttgatggtacatttggga
gtaagtacggagaaacgactagcggagatatgtcagctttcccctcaagaactgaggaaa
tatatgggaatgttgcttgttcacagactggtgaaacgtcatgtgggcaaagaaaaagct
cctgtcgatcatcgtcgtaccgatttcgatccagaagagaaaatgcgaatacgcgatgtc
atctactggtatctagactaccgagagttcgccaatgtcacaaagtaccgtctagcggta
atgcgtcgatctatcgatgataaagtcaagaacgaagtcggtgtcagaggatacctctgt
acatcttgtggtcgaacttatgatccgcttgatttaggtcatctttttgacccccaaacc
aacgtttttcgttgtgaaacttgttcagaggagttggtggaacatgatccaagtcaagat
gacacaactggtgacaaagtcgataggatgggacaatttaatctcgccaccgcgcccata
agagatgccttaaaatctctagagggtatgactttgccgagtgtcaatatagtggcgtgg
atggcgcagaatgtaaaaagcgatttacctgtgcaggctacagaggggagagaggaagaa
aagaaagtgcagattgtgcttggctcgggtggagaaagggagagattagaagcggagaga
gctgccgaggcacaacgggtacaaacctctttgcctgtttggcatacacagtccactatt
accggccaatccacctctcttggtttagccgcagagcgtaaagcgtctggacctcatctc
gccgtctccaggaataccgatggaggggtggatgacctcgaggaacattacgctaacttg
gccggggcgagtggagaatcttttcctctggtcaagcaagaagaagaggatgaggacgag
gacgacttccttccatcgagtcagcctggagagccggatgaaggcggaccaagtggagag
gatcaagcaaagatgattatggtcaaaggcgtgcccaagcctttgggtgagatcacggaa
gaggacgaggcgcacatgacaccggaagaataccaagtgggtcgtcatctttataaatgt
catcaactgataatcaggcatactacgaagcaatatcctaacatcccacatgcatatata
taa

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