Tremella mesenterica: TREMEDRAFT_26611 Help Entry TREMEDRAFT_26611  CDS       T03139                                  Name (RefSeq) hypothetical protein   KO K02999   DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] Organism tms  Tremella mesenterica Pathway tms03020   RNA polymerase Brite KEGG Orthology (KO) [BR:tms00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     TREMEDRAFT_26611  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tms03021]     TREMEDRAFT_26611 Enzymes [BR:tms01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      TREMEDRAFT_26611 Transcription machinery [BR:tms03021]  Eukaryotic type   RNA polymerase I system    RNA polymerase I     Core subunits      TREMEDRAFT_26611 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 Motif Other DBs NCBI-GeneID:  18491644 NCBI-ProteinID:  XP_007000778 JGI:  Treme1_26611 LinkDB All DBs Position Unknown AA seq 1691 aa AA seqDB search MDISHSLPSEVTALSFSFLSSRDVEAISVQKIDNPILLDNLGLPTKGGLYDPKLGPMSSR DICQTCHLSYFACPGHFGHIVLPNPVYHPLFMRECYILLQSVCQFCHHFKMPEILLRQYI GRLRLLDAGLVERSHDMAYFLPRTSKDDGDDDGEEGDEKTRADAVSAESAAELIVRMDGY VKSCLHEAKKRSGKEKYMDGLIFEERRKARNAFIAAAKGWRSCKRCSAHGFTYRKEKSIK IVELDLDPKKKEVNKVLGVRRPQVIGSGSRSSHGSSSSDEDENIDVDSDEGVTVARAANG QIKGRRGRNERVMPASEVREHIGLLFSKESEMCNLLYGRNRNSKSNINCSPSADIFFLDV LPVTPTRFRPASKLGDELFENSQNSLLTAVIQTCRRIQDLNQRLHDQVKAERGEIVLDAI AKAEGSRTFELLLEALIKVQHDVNSFVDSTQNPTIMRGGKLPPQGVKQLLEKKEGLFRKH MMGKRVNYAARSVISPDINIETNEIGIPPVFAKKLTYPEPVTAQNINELRQLVINGPKVH PGAALVQNEDGTQVSLDKTTIEQRQAIANQLLTPQSDAYSAGSSAGPPARNKKVYRHIRD GDIVILNRQPTLHKPSMMAHKVKVLLGEKTIRMHYANCNSYNADFDGDEMNIHFPQNEVA RAESLMIANTDNQYLVPTSGKPLRGLIQDHVVAGVWMCNKSSFFTREEYFQLIYGALRTE DNYITQNRIITLPPAIWKPRPMWTGKQIISTILTNLTPSNAKGLNLNSENKISNKLWQRD DSSDQTMSEENVIFLDGHLICGVLDKSQYGASAYGLVHSVHELYGPVTANRLLGVLSRLL TKYLQHDAFSCRMDDLLLTAEGEKIRKSILDDAARDGERAAIKYVGLPPGSSVDDPGTAR NLVTRLEETLRDDHLMAGLDAVMQTAFNKTTSKINNDVLPKHLVRPFPDNNMQLMTISGA KGSKVNASQISTLLGQQALEGRRVPTMVSGKTLPSFKPFDTSARAGGYVANRFLTGIRPQ EYYFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGVKVHYDHTVRDSDSSVLQFLYGED SLDVTKAQHLGKFDFAARNHESLLNRSRPRDVLPVVIQDEAVDKMKKALKKPHKHEPALS LFPPSRYLGSMSETYARKLATYIEQNRFGFITKKGEIKSSPYTSERVSDKEFLQLARVRY MRSLVEPGEAVGLLASQGVGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIVMTASTKPI TPTMKLALRPGVSDQQADSFVKHVSRLTLSQVVERVSVTERLSNKNDEVRQRKYTVLLEF YPSEEYRKEYEITTLQVYQALVLSFAKRLKEEISKEMKNSTRSSAQELQVDRGLTVRKGG DDGEGDEVPTIRKGRDDELDNDDEDSYQIKRQNQGRQHEYEEDDSNSDSGIGDLEDFVER NMEEDDDEEEEDEDLGIRDPKEKARKDQLTDTLQDEFKKVLPYATSVNFDVHSGKSAQFD MEFAANAPKLLLVDIIERACRLAVIHEVSSINRCMKIFDDKGEFTGALITEGSNLKGMWA LADELIDLDKLGSNDIYALLQTYGVEAARRAIIDEVSSVFGAYGITVDYRHISVIADYMT HAGGYKAFNRTGISSKSSPLLKASFETTVQFLSEATLAGDIDDLTSPAAKIVLGRPSSSG TGAFDIRAPIA NT seq 5076 nt NT seq  +upstreamnt  +downstreamnt atggacatctcccactccctcccttccgaagtcaccgccctctccttctccttcctctct tctcgtgatgtcgaagccatttcagttcaaaaaattgacaaccctatcctcctcgacaac ctcggtcttcctacaaaaggtggtctgtatgatcccaaactaggacccatgagttctcga gatatttgccagacatgtcatttatcctatttcgcctgtcccggccatttcgggcatata gtcttacccaatcctgtctaccatccacttttcatgcgagaatgttacattcttcttcag tcggtatgtcaattctgtcatcacttcaaaatgcccgagatactcctacgacaatacatt ggtcgtttgcggttgctcgatgcagggttagtggagagatcacacgatatggcgtatttc ttacctcgaacaagcaaagatgacggagatgatgatggagaagaaggtgatgagaagaca agagcagatgctgtatctgcggaatctgctgcagaactgatcgtacgcatggatggatat gtgaaatcatgtttgcacgaagcgaagaaacgttcgggtaaagagaagtatatggatggt ttgatatttgaggaacggcgtaaggctaggaacgcattcatagccgctgccaagggctgg aggtcatgtaagcgatgttcggcacatgggttcacatatcggaaagagaaatccatcaaa attgtcgaactagacctcgatcctaagaagaaagaagtcaacaaagtccttggcgtccga cgccctcaagtcatcgggagtggtagtcgtagcagtcatggtagctcctcttccgacgaa gatgaaaacatagacgtcgattctgacgaaggcgtcacagtggctagagctgcgaatggc cagatcaaagggcgaagaggaaggaatgaaagagtcatgcccgcctcggaagtacgagag catataggtttacttttctccaaagaatctgaaatgtgtaatttgctttatgggcgaaac cgaaattccaaatctaatatcaattgctctccatcagccgacatctttttccttgacgtt cttcccgttactccaactcgattccgaccggcctccaaattgggcgacgagctattcgag aacagtcagaattcccttctcaccgcggttatccaaacctgtcgccgtatacaggatctc aatcagcgtctacatgatcaagtgaaagcagagagaggcgagatcgtacttgatgccatt gccaaagccgaaggatccaggacatttgaacttttacttgaggctctcatcaaagtacaa cacgatgtcaacagttttgtggacagcactcaaaatcctaccatcatgagaggtgggaaa ttacctccccaaggtgtcaagcagctactagagaagaaagaaggactgtttaggaaacat atgatggggaaaagagtcaattatgctgctcgctctgtgatatcacccgacatcaacatc gaaaccaacgaaattggtataccacctgttttcgccaaaaagctcacttatcctgagccc gtcactgctcaaaacatcaacgaattgcgacagttagtcataaatggtccgaaagttcat cccggtgccgcacttgttcagaacgaggacgggacgcaggtttcactagacaaaaccacc atcgagcaacgacaagcaatcgctaaccaactcctcactcctcaaagcgacgcatactca gcagggagcagtgccggtcctcctgccagaaataaaaaagtttatcgacatattcgggat ggtgacattgtgatactcaatcgtcaaccgactcttcacaaaccaagtatgatggcccac aaagtcaaagtactgctcggtgagaagacgattcgaatgcactacgccaattgtaattcg tacaacgccgactttgacggagacgaaatgaacatccatttccctcagaacgaggtggca agagcagagtcactcatgatcgccaatacggacaatcaatatctcgtaccaacctccggt aagccacttcgagggttgatacaagatcatgtggtggctggtgtgtggatgtgtaacaag tcgtcattcttcactagagaagaatactttcaactcatttacggtgcactccgtacagaa gataattatattactcagaatagaattatcaccttgccaccggcgatatggaagcctcga cctatgtggacaggaaaacagatcatctccaccatcctcacgaaccttaccccatcaaat gccaaaggtctcaatctcaactccgaaaataagatttccaacaaactctggcaacgtgat gactcctctgatcagaccatgtccgaagaaaacgtcatctttctcgatggtcatctcatt tgtggtgtacttgataaatcgcaatatggtgcttcggcatacggtctcgtccattctgtt catgagctttacggacccgtcactgccaaccgtctccttggggtgctgtcacggctcctc acaaagtatcttcaacatgacgcattctcttgtcggatggacgatttacttctcacagct gaaggagagaaaatccgtaaatcaatcctagacgatgctgctcgggatggcgaacgagca gctatcaaatatgttggtctacctccgggttcaagcgtcgacgatcctggaaccgcaagg aatctcgttactcgactggaagagaccttgagggatgatcatctcatggctggattagac gctgtgatgcaaactgcattcaacaaaacgacttcgaaaatcaataacgacgtccttccg aaacatctggttagacctttccccgataacaacatgcagctcatgaccatttccggagcg aaaggatcaaaagtcaacgcatcgcaaatatcgactttactcggtcaacaagctttagaa ggaagacgtgtccccaccatggtcagtggtaagaccttgccatctttcaaaccttttgat acctccgcacgtgcaggaggatatgtggcaaatcgtttccttactggtattcgaccacaa gaatattactttcattgtatggcaggtcgtgaaggattgatcgacacggctgttaaaacc agtcgatcaggttatcttcaaagatgtttgatcaaacatctcgaaggtgtcaaagtacat tacgatcatactgttcgagatagtgactcctctgttcttcaattcctttacggagaggat tctttagacgtaaccaaagctcaacatttggggaaattcgatttcgcagcgagaaatcat gaatcacttttgaatcgttcgagaccgagagacgtccttcctgtggttattcaagatgag gccgttgataagatgaagaaagctctgaagaaacctcataaacacgaaccggccctttcg ttattcccaccatcccgttacctaggaagtatgtctgaaacatatgcaagaaaactcgcc acatacatcgaacaaaatcggttcgggtttatcacaaaaaaaggagagatcaaatcttct ccatatacatcagaacgagtcagcgacaaagaattcttacaattagcaagagtgagatat atgcgaagtttggtagaacctggagaagctgttggtttactggcttcacaaggagtagga gaaccatcaactcaaatgacacttaacacatttcatctcgcaggtcatggtgcagcaaac gttacacttggtattccaagattaagagaaatcgtaatgacggcttccacaaaacctatt accccaactatgaaacttgcccttcgtcctggtgtatcggatcaacaagcggattcattc gttaaacatgtttctagattaacattatctcaagttgtagaacgtgtttcagttacggaa cgtttatcgaataaaaatgatgaagttcgtcaaaggaaatataccgttttacttgaattt tatccatcagaagaatatcgtaaagaatatgaaatcaccactttacaagtttatcaagct ttggttctatcattcgccaaacgattaaaagaagaaatttctaaagaaatgaaaaattca actcgttcttcggctcaggaattacaagttgatagaggtttaacagttagaaaaggaggc gatgatggagaaggtgatgaagtaccaacgatcagaaaaggaagagatgatgaattggat aatgatgatgaagattcatatcaaataaaaagacaaaatcaaggacgtcaacatgaatat gaagaagatgattcaaattcagattctggtattggtgatttagaagatttcgtagaacgt aatatggaagaagacgatgatgaggaggaggaggatgaggatcttgggattagagatcct aaggagaaagcgaggaaagatcaattgacagatactttgcaagatgagtttaaaaaggtt ttaccttatgccaccagtgttaattttgatgtacattctggtaaatcggcacaattcgat atggaatttgctgcgaatgcaccaaagttgttattggtggatatcatagaaagagcttgt agattggctgtgatacatgaagtcagtagtataaatcggtgtatgaagatatttgatgat aagggggagtttaccggcgccctcatcacagaaggttcaaaccttaaaggaatgtgggca ttagcagatgaacttatcgatcttgataaactcggttccaatgatatttacgcactttta caaacttatggtgttgaagctgccagaagggcgattatcgatgaagtttcttcggttttt ggagcttatggtataactgtggattatcgtcatatcagtgttattgctgattatatgaca catgcaggaggatacaaagcattcaacagaactggtatttcatcaaaatcttctccttta ctcaaagcttctttcgaaactactgttcaattcctctccgaagctaccttggcgggagat atcgacgaccttacttctcccgctgcgaagatcgttttgggtagaccgagttctagtggg acgggtgctttcgatatacgagctcctattgcttga

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