Tremella mesenterica: TREMEDRAFT_26727
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Entry
TREMEDRAFT_26727 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14319
Ran GTPase-activating protein 1
Organism
tms
Tremella mesenterica
Pathway
tms03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TREMEDRAFT_26727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_26727
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
TREMEDRAFT_26727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
Patatin
LRR_8
LRR_2
Motif
Other DBs
NCBI-GeneID:
18491653
NCBI-ProteinID:
XP_007000787
JGI:
Treme1_26727
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MSTSTSVSSSDNHKVWSILGKNLKADTADQLEPYFSQLVEMKDVEEVHLGGNSLGVGACE
ALAEVFKQKKGLKIVNLADIFTGRLITEIPQSLSALCSSLISHTSLVEINLSDNAFGGRC
ADSMVPFLSSNTHFQIFKLNNNGLGPQGGIIISSALLKNAEKCKSEGKPSNLKVIICGRN
RLENGSASSWAKAFSAHGNLKEIRMPQNGIRMEGIKSLSEGLENNTKLEILDLQDNTITK
IGMRSLIKVLPKWKELKELNLSDCLLGPSGGIALASLLAKGNNDKLEILKLQYGELDKRF
VEILTEAIAQHLKKLKELELNGNWFEADDDCVEGLRKALALNGFEDALDELDDMEEPPSE
EEDEDEDEDGKDEDDDEEPDDGVAPGVDGTASLPPADDKDTDVLADLLEKVHVKQD
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttccacttccgtttcttccagtgataatcacaaagtatggtcaatattaggt
aaaaacctaaaagcagacaccgcagatcaattggaaccgtacttttctcaacttgtggag
atgaaggatgttgaagaggtacatctcggtgggaattctttaggtgttggggcttgtgaa
gctttggcggaggttttcaaacagaagaaaggtctcaagatcgtcaatttagccgatatc
ttcacaggaagactaatcactgaaatccctcaatctctctctgctctatgttcttctctc
atatcccatacttccttggtcgaaatcaatttatccgataacgcattcggtggtcgttgt
gcagattcaatggtcccattcctaagttccaacactcatttccaaatattcaaacttaac
aacaacggtctaggtcctcaaggcggtatcatcatttcttcagctttattaaaaaatgca
gagaaatgtaaatccgaaggtaaaccaagtaatttaaaagtaatcatttgtggtaggaat
cgattagaaaatggttctgcttcatcttgggcaaaagcattttcagctcatgggaatttg
aaagaaatcagaatgcctcaaaatggaataagaatggaaggtattaaatctttatcagaa
ggtttagagaataatacaaaattggaaatattagatcttcaagataatacaataacgaaa
ataggaatgagaagtttgataaaagttttacccaaatggaaagaattgaaagaacttaat
ctttctgattgtttgttaggaccttcaggtggaatagctttagctagtttattggctaaa
ggtaataatgataaattagaaatattgaaattacaatatggtgaattggataaaaggttt
gtagagattttgaccgaagctatcgctcaacatttgaaaaagttgaaagaattggaattg
aatgggaattggtttgaagcggatgatgattgtgttgaagggttgagaaaagctttagct
ttgaatggatttgaagatgctttggatgaacttgacgatatggaagaaccaccctcagaa
gaagaggatgaagatgaagatgaagatggaaaggatgaagatgatgatgaagaaccagat
gacggtgtggctcctggtgtagacggtacggcctctttaccccctgcggacgacaaagac
acggatgttcttgccgatttgctcgagaaggttcatgtgaaacaagattga
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