Tremella mesenterica: TREMEDRAFT_27197
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Entry
TREMEDRAFT_27197 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K06675
structural maintenance of chromosome 4
Organism
tms
Tremella mesenterica
Pathway
tms04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
TREMEDRAFT_27197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_27197
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
TREMEDRAFT_27197
Condensin II
TREMEDRAFT_27197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
18491727
NCBI-ProteinID:
XP_007002317
JGI:
Treme1_27197
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MPPKRSTRVVSGASTTSTRSSRARKLAVPSPSPSDGSPAKDHAQDSDDESEQDVKPNTRR
STGKGKTAVKAEPRRTAKPVPTARDEESDQDEEEEEQDDEVHVKIEKPSSSDIDFTPSKS
GPSIAASRSKNEEDQSAQDAEDADATITLPSPPKIDDDVPSTPQTPTAPRVVPIPMTAPA
PPPPAPTGPKPRLTIHKLVLVNFKSYAGRQEIGPFHKSFSAIVGPNGSGKSNTIDALLFV
FGYRASKMRQGKLSELIHNSAGKEGLESCSVEVWFREIVDLPGVDNFLLVPNSQLVVTRT
AYRNNSSKYTINDKTSSFTEVTSLLKGKGIDLDHNRFLILQGEVESIAQMKAKAQNEHED
GLLEYLEDIIGTTKYKQPIEDANLEVESLNEQRGEKMNRLRVVEREKAALEATEAFLKDS
NELTRKKSLLWQYHMYTLTNNIEITSKAIESLTADLSQEQERNAGHLAEIDSLQKEYDEK
LATFEQVKKFTDDLVKESKKFEKEEVGLQEKKKHLVSKQKKFKKSITEDGHARSEALSTI
DNLSSELEKNRVKVADLEKKLVTEEAELDEVRESLKDKTEGFTSQIEIKQRELEPWTAKI
SEKQSLIDVATSERDLLTQKASGMQSALDEAKVNLEKLRGSDASKQQEYAALQKEVIRVQ
QQLSDAEKAAAGTSAKGEQLRSKLSSCRQRADEAKASLAADKSENAVLNSLNKLKTQGRI
KGFHGRLGDLGVIDDKYDVAVTTACSALNNLVVDTVEQGQACIEHLRKGNVGRASFMVLD
KLPPRDLGRIETPENVPRLFDLIKPKDPKFAPAFFKGVFNTLVAEDLAQAQRIGYGKKRW
RVVTLAGQLIDPSGTMSGGGTKVSRGGMSSKFVGDKVAPEVVARYEQESVQAEQELSAFQ
AEKKAAEAEVTRLKKRVPEMEIAIEKMELDVQTGSKRIAEAEKRLSELKSQSKPDAEDEK
RIKTLNSEITSLSKEIDKLREKSSGISDQIKSLQNQILEVGGVRLRAIQSKVSITKGLVD
LANEAITKAEVNQAKSQRDAEKLEKTILSNQEKLKEVETELSVVEGDLQAVSADLNVIRD
KVQEAQDSSTDVQEALSASKLELDEKSADINAFRTLEMDYKQKIEDNSRIQKDSKDKLKH
WKKRHEELELAYIDEEDEDDEIIEEQTVEDREGEIVKGEKKENDEGKSKSKKDSFELVEY
SSDELRSVDKEMLTAEITALEEEVTKAKPNLNVLADYRKRETEFLDRAKDMEIVTTARDN
AKKRYDELRKVRLEEFMAGFTAISAKLKEMYQMITMGGNAEIELIDSMDPFSEGVVLSIM
PPKKSWRAIANLSGGEKTLASLALVFALHVFKPTPLYFMDEIDAALDFKNVSIVANYIQS
KTQAAQFIVISLRNDMFELAHRLVGIYKTSNCTKSIAIDNKDLRSQALPKRRVMPSDPNR
HNVSAAPTPAKSIPSSTPLPQRIAV
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaaacgctcaacacgtgtagtgtctggagcttccacaacttccactagatct
tctcgggcacggaaacttgcggtcccttcaccatcaccttccgacggttctcctgccaag
gatcacgctcaagattcagatgacgagtctgaacaagatgtcaaaccgaataccaggagg
agtactggaaaggggaagacggctgtgaaagcggagccacgaaggactgccaagcctgtt
ccaacagctcgggatgaagaatcagatcaagatgaggaagaggaagagcaggacgacgag
gtacatgtcaaaatagagaaaccgtcttcatctgacattgattttaccccttccaaatcc
ggtccgtctatagctgccagtcgatcaaagaatgaagaagatcaatctgcccaagatgcc
gaagatgcggatgctaccatcaccctcccctcccctcccaaaatcgacgatgatgtacct
tcaactccccagacgccaacagccccacgtgttgtacctatccctatgaccgcacctgcc
ccaccgccgccagcaccgacgggtccgaaacctagattgaccatccacaagctggtgctg
gtgaatttcaaatcatacgctggaagacaagaaataggaccgtttcataagtctttcagt
gccattgtgggtccgaacgggagtggaaagagtaataccatcgacgctttgttgtttgta
ttcggctacagagcgagtaagatgcgacaaggaaagttgagcgagttgatacacaattcc
gctggtaaggagggtttggaaagctgttccgtggaagtgtggtttcgtgaaattgtcgat
ctgccaggagttgacaacttcttgttggtaccaaactcacaattggttgtgaccaggacg
gcatataggaacaactcgtcaaagtatacgatcaacgataagacttcttcattcacagaa
gtcacttcacttctcaaaggcaaaggtatcgatctggaccataatcgtttcctcatcctt
cagggcgaagtcgagtctatcgcgcagatgaaagcaaaggcgcagaacgagcatgaggat
ggcttgttagagtatctggaagacatcataggtaccacgaaatacaaacaacctattgaa
gatgccaatcttgaagttgagtccctcaacgagcaaagaggagagaagatgaatcgactt
agggttgtggagcgagaaaaggcggctttggaggcgacggaggcgtttctgaaagactca
aacgagttgacgaggaaaaagagtctcttgtggcagtatcacatgtatactcttacgaac
aacatcgagatcacctccaaggcaatcgaatccttgacagctgatttgagtcaagagcaa
gagcgtaacgctggtcatctggcagaaatcgacagtttgcaaaaggaatacgacgagaaa
ctcgcgactttcgagcaagtgaagaagttcactgatgacctcgtgaaagagtctaaaaag
ttcgagaaggaagaagtcggtcttcaagaaaagaaaaaacatctcgtttcaaagcagaaa
aagttcaaaaagtcgattactgaagatgggcatgctcgatcggaggcgttatccactatc
gacaatctgtctagtgaactggagaagaatcgggtgaaagttgccgatttggagaagaag
cttgtcacggaagaagctgaattagatgaagtccgagagagtctcaaagataagactgaa
gggttcacctctcagatcgaaatcaaacaacgagagctagaaccttggactgccaagatt
agcgagaaacaatctctcatcgatgtagcgacttccgagagagatctcctcactcaaaaa
gcttctgggatgcaatcagcactggacgaagctaaagtgaaccttgaaaaactacgagga
agtgatgcttcgaaacaacaagaatacgctgctttacaaaaagaagtgattcgagttcaa
caacaattatcagatgcagagaaagctgcggctggtacttccgccaaaggagaacaatta
cgttcaaagctttcttcatgtcgacaaagagcggacgaagccaaagcgtctttagcagcg
gataaatcggaaaacgccgttctgaacagtttgaacaagctcaagactcaaggtcggatc
aaaggctttcatggtcgcctaggcgatttaggtgtgatcgatgataaatacgacgtggca
gtcacaaccgcatgttctgctttaaacaacttagtcgtagatactgtcgaacaaggtcaa
gcgtgtatcgaacatttacgcaaaggtaatgttggaagagcttcttttatggtattggac
aaattaccaccaagagatttaggtaggatagaaactcctgaaaacgttcctagactattc
gatcttatcaaacctaaagacccaaagttcgctcctgctttcttcaagggagtgttcaat
actctcgtagcggaagatctggcacaagcccagaggatagggtatggaaagaaaagatgg
agagtcgtgactttagcaggacaattgatagatccttctggtaccatgtcaggtggtggt
acaaaggtttcaagaggaggaatgagtagtaagtttgtgggtgataaagttgcgcctgaa
gtagtggcgagatacgaacaggaaagtgttcaagcggaacaggaattgtcggctttccaa
gcggaaaagaaagctgcagaggcggaggtgacgaggttgaagaagagagtaccggagatg
gagatagctatcgaaaaaatggaactggatgtgcaaacaggttcgaagaggattgccgag
gctgagaaacgtttgtccgaactcaaatctcaaagcaaacccgacgctgaagatgaaaaa
cgtatcaaaactctcaattccgaaatcacttcattatcaaaagaaatcgataaactacgt
gaaaaatcatcaggtatatctgatcaaataaaatcactccaaaatcaaatcctcgaagtt
ggtggtgttcgtctccgagctatccaatcgaaagtctccataactaaaggattggtagat
ttagccaacgaagcaataaccaaagcagaagtcaatcaagctaaatctcaacgtgatgcg
gagaaattggaaaagaccatcttgtcgaatcaagagaaactcaaggaagttgaaacggaa
ttatctgttgtcgaaggggatttacaagctgtttctgctgatttgaacgttataagggat
aaagttcaagaagcacaagattcaagtacagatgttcaagaagctttatctgctagtaaa
ttggaattagatgagaaatcagctgatataaacgctttcaggactcttgagatggactat
aaacagaagattgaagacaattcaagaatacaaaaagatagtaaagataagttgaaacat
tggaaaaagagacatgaagaattggaattggcttatattgatgaggaagatgaagatgat
gaaatcattgaagaacagactgttgaagatagagagggagaaattgtcaaaggtgagaag
aaggagaatgatgaagggaaatccaaatcgaagaaagattcttttgaattggtcgaatat
tcttcagacgaattacgatcggtagataaagaaatgctcactgcggaaattactgctttg
gaagaagaagtaacaaaagctaaacctaacctcaacgttttggcagattatcgtaaacgt
gaaacagagtttttagatagagcaaaagatatggaaatcgtaactaccgctagggataat
gcgaagaaacgttatgatgaattgaggaaagttagattggaggagtttatggctggtttt
actgccattagtgcgaaacttaaagagatgtatcaaatgatcaccatgggagggaacgcc
gaaatagagttgatagattctatggaccctttttccgaaggcgtagtactatcaatcatg
cccccaaagaaatcatggagagccatagcaaatttatctggtggagaaaaaactctagct
tcactcgcattagtcttcgcattacatgtcttcaaacctacccctttatactttatggac
gaaattgacgccgcattggatttcaagaatgttagtattgtggcgaattatattcaaagt
aaaactcaagctgcgcaatttatcgtgatttctttaaggaatgatatgttcgaattagca
catcgattagttggcatttacaagacttccaattgtacaaagagtatagctatcgacaac
aaagatcttcgatctcaagctttacctaaacgacgtgtaatgccatcagatcccaataga
cataatgtcagcgctgcccctacaccagccaagagtatacccagttcgacccctttacca
caacgtatcgctgtgtag
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