Tremella mesenterica: TREMEDRAFT_27383
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Entry
TREMEDRAFT_27383 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tms
Tremella mesenterica
Pathway
tms00061
Fatty acid biosynthesis
tms00071
Fatty acid degradation
tms01100
Metabolic pathways
tms01212
Fatty acid metabolism
tms04146
Peroxisome
Module
tms_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TREMEDRAFT_27383
00071 Fatty acid degradation
TREMEDRAFT_27383
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TREMEDRAFT_27383
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tms01004
]
TREMEDRAFT_27383
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tms04147
]
TREMEDRAFT_27383
Enzymes [BR:
tms01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TREMEDRAFT_27383
Lipid biosynthesis proteins [BR:
tms01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TREMEDRAFT_27383
Exosome [BR:
tms04147
]
Exosomal proteins
Exosomal proteins of breast milk
TREMEDRAFT_27383
Exosomal proteins of breast cancer cells
TREMEDRAFT_27383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
18491756
NCBI-ProteinID:
XP_007002346
JGI:
Treme1_27383
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MSELACVPLPSDPSIRRCHLSVDKLLTRPAGEEVVIVGDIYSYASKKYGDKIACYYRDVI
GVVEEIKIVNRDGKEEEKVWKYFTLSTPKPVTYNQLDQTVTTLTSGLINLGFTNPSLPIP
SRPRVSIYADTCLNWQLIAQTFARLGHTITTAYTTLGEEGLIVSLEEPEVELVFCGEGQL
NLVGKVLEKVEKVKWVVYDDKETPTLEQISKTVESRGGKIITFTALKQLGLDKPVRAEDL
GPKPTEEDLFCIMYTSGSTGPPKGVMLSNANVISSLAGSIKLFETIFRPESDLLMAYLPL
AHILEQFLEYTFLLLGVPLAYASVKTLLDDSVRNCQGDFAAYKPTLFAGVPAVFEMIRKG
MMKKISDAGPIVGTVFSFAVWGKKTLPWPLNAIIDRVLFGRVKQATGGRVRMTVCGGGAL
SESTQIFLSTVLAPIMQGYGLTETCGMSTITTPDRWSVGSVGTLGPSTELKLHSLPELGY
LTNVNPPQGEIWLRGSNVCKGYFNRPELTAEAFTDDGWLKTGDIGRWSSDGTLRIVDRIK
HLVKLQNGEYLALDKVESIYKACDVVMMICIVAPPQAERPIAIVYPHDGNLRNYLSAAKL
PSNGTPQSWAKDEKVVNIILGQLLAVGQRAGLSKAEWVRDVIMTDEEWSPENGLLTPSMK
LARTTIAQRYKDEIEVSLRDTAGIDGSGTYVQASLAKQ
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagctcgcatgcgtaccactcccctcagatccatctataagacgatgtcatctt
tccgtcgataaattactaacacgtccagctggggaagaggtggtgatcgtcggtgatata
tactcatatgcgagtaaaaagtatggtgataagattgcttgttattatagagatgtaatt
ggggttgtagaagagatcaagatagttaaccgggatggaaaagaagaagaaaaagtttgg
aaatacttcacactctccacacctaaacccgtaacttacaatcaactcgatcaaacagta
accaccttaacatccggtctcatcaatctaggcttcacaaacccatctcttcccatccct
tctcgtccacgagtatccatttacgcagatacatgtctcaattggcaattgattgctcag
acattcgccaggttgggtcatactattaccacggcttataccacactgggggaagaaggt
ttgatcgtcagtctcgaagaaccggaggtggagttggttttctgtggggaaggacaattg
aatttggtgggaaaggttttggagaaggttgaaaaggttaaatgggtggtttatgatgac
aaggaaacgcccacgctggagcaaatctccaagacggtcgaatctcgtgggggcaaaatc
atcactttcacagctctcaagcaactgggcttggacaaaccagtcagagccgaagacctt
ggacctaaacccaccgaggaagatctcttctgtatcatgtacacctcaggttccactggt
cctccaaaaggtgtcatgttgtctaacgcgaacgtcatctcttcattggcgggaagtatc
aaactgttcgaaacgatcttccgaccagagtccgatttgctgatggcttatctccctttg
gcacatatccttgaacagttcctggaatacaccttcctccttcttggtgttcctctcgca
tatgctagcgttaagacgctgctagatgatagcgttcgtaattgtcagggtgatttcgcc
gcttacaaacctacattattcgccggagttcccgcagtcttcgaaatgatacggaaaggt
atgatgaaaaagatttcagacgccggaccgatcgtgggaacagtcttctcatttgctgta
tggggcaagaaaacacttccatggccactcaacgcaataatcgatcgagttttgtttggc
cgagtcaagcaagcgacaggtggtagagttcgaatgacggtatgtggtggtggagctttg
agtgaatcgactcagatatttctcagtacggtattagcacccataatgcaaggttacgga
ctcacagaaacttgcggaatgtcaactatcactactcctgatagatggtcggttggaagt
gttggaactttaggtccatccactgaactcaagcttcattctcttcctgagttgggttat
cttaccaatgtcaaccctcctcaaggagagatttggcttcgtggttccaacgtctgtaaa
ggttatttcaaccgacctgaattgaccgcggaagctttcacagatgatggatggttgaag
actggagatatcggaaggtggtcttctgatggaacccttcgaatagttgatcgtatcaag
catctggtcaagttgcaaaacggtgaatatcttgctttagacaaagtcgaatcgatttac
aaagcttgtgatgtcgtgatgatgatttgtatcgttgctcctcctcaagctgaacgacct
atcgctatcgtgtatcctcacgacggtaacctacgtaattacctctctgcggctaaactt
cccagtaacggtacaccacaatcttgggctaaagatgaaaaagtggtaaacatcattctt
ggacagttactcgctgttggtcaacgtgccggattgagtaaagccgagtgggtgagggat
gtcattatgacggatgaagagtggtctcccgagaatggtctcctcactccttctatgaaa
ctcgcccggactaccattgctcagaggtacaaagatgaaattgaggtaagtttgagggat
acagctggaatagatggttcaggaacttacgtccaggctagccttgcaaagcagtga
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integrated database retrieval system
