Tremella mesenterica: TREMEDRAFT_27507
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Entry
TREMEDRAFT_27507 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
tms
Tremella mesenterica
Pathway
tms03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TREMEDRAFT_27507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_27507
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TREMEDRAFT_27507
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
18491769
NCBI-ProteinID:
XP_007002359
JGI:
Treme1_27507
LinkDB
All DBs
Position
Unknown
AA seq
263 aa
AA seq
DB search
MTTFDRRRIQAPETSYAPTFESSSIIVDNGLGTGDDGFHVGSSQPVFKAGLIDQANGSGY
VEIGGVKIACSVYGPRPKQPPYSPEGTLNLEIKFAPFASHPRRAPLRDTEPIPLSTLLYR
LLLPCLQLHLLPKSSIDVFLLILESDTLSNTLSAALTVASGAIANAGIPMSALGIGGVVA
RGEGAGGEKRSELICDPSIEEENSAEACLTLGVMPALGKLSSCWFTGEADVEDVGLMVDC
AVKETKMTHAVLATGLLESADVS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatttgatagaagacgaatacaagctccggaaacttcttatgctcctactttc
gagtcttcctcaattattgtagataatggcctgggtacaggtgatgatggatttcatgtg
ggatcctcacagccagtcttcaaagcgggtcttattgaccaagctaatgggagtggatac
gtcgaaattggtggtgtcaagatagcttgttcagtttacggtccaagaccaaaacaacca
ccatattcccccgaaggtacactgaacctcgaaatcaaattcgctccgtttgcttctcac
cctcgacgagcacctctgcgggacaccgaaccgatcccactctccaccctcctctaccgt
cttcttctcccttgtctccaactccatctcttacccaaatcatccatagacgtcttcctc
ctcatcctagaatcagacaccttgtccaacaccttatcggcagctttgacggtagctagt
ggagctatagccaatgctggtatacccatgtctgcgctgggaataggaggagtggtcgca
cgtggagaaggggcgggaggggaaaagagatccgagcttatatgtgatccctcaattgag
gaagagaatagtgcggaagcttgccttacattaggcgtcatgcccgctttggggaaattg
agttcttgttggttcaccggagaggcggatgttgaggatgttggtttgatggtggattgc
gctgtcaaagagacaaagatgactcatgcggttttagcgacaggtttattagagtctgcc
gatgtctcataa
DBGET
integrated database retrieval system
