Tremella mesenterica: TREMEDRAFT_27662
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Entry
TREMEDRAFT_27662 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K13211
GC-rich sequence DNA-binding factor
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tms03041
]
TREMEDRAFT_27662
Spliceosome [BR:
tms03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
TREMEDRAFT_27662
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NTR2
Motif
Other DBs
NCBI-GeneID:
18491788
NCBI-ProteinID:
XP_007002378
JGI:
Treme1_27662
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MFIKRAKSRPSLRAREQDDQSDMVVSKDHATTSNLEGEEETSGGVMERKKVKGKERRKEH
LKSGGPRLSFGNDGEDGSSGFKPRKSLLSQQVKLAPLLSAENEVKESVVTYSSDYLEMLK
ASTPSRGPKPATVEIENGEDNAEDEDSTGLSRLAREKYSSKIVEDSTVGIPDAAAIASAK
MKRQAAVGSQQRGLGDIGEDYISLGGTQMAVYDGDKGPHPESRLMREEDEGEEGDEGLAD
YTEENEKIYLGKNANKVAARRHKGEMNELIAESREAEDEDDEETREWEEAQARRAGRWEE
QVPEKKVQKGYQPAPIPRIRPMPTISAAQARVAKALSQLQAQKAQDEANLEVVVKELATF
ESQERELRSEVERLEGKREWVEEFRGWVEMLGNFLEDKVPKLEEIEKDALHHYKERSRII
SQRRELDDQDDLALCFGIPRPTEVTQVDELGRERDMLAEAGPSSVTRRARRDERQLRRSR
RKERSFRQVKPSVEEEEGFSTDSTLAEGDMEDYRTALVDLDKRVRGLLDDVKAEDFKDPN
LGLAVRFADWRKRYEEEYVNAFGGLGLVHAWEFWARGEMVGWEPFRSSEPIHSFHWFTSI
YKYNRPSSITQLEDEMEDEIPLGPEGDLIPELISKVVVPLLVNMFENGAYDPHSSKQTRR
AGDLLDMIGELIGKENKKFQSLLKALLETYHTHLLSLSHLISSSSQHDSIPPPTFSPESR
LSMERFLRRRLKLLRNILQWRHVVPFEIRELCARLVGEVLRPILSRNWDGGGREMALKVL
QISAGILPSDLQSFLLTGPLVK
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcaaaagggcgaaatctcgaccttctttacgagctcgtgaacaagatgatcag
tcagatatggtcgtatcgaaagatcatgcgacaacttcaaacctcgaaggggaagaagaa
acgtccggaggtgtgatggagcgtaaaaaggtaaaagggaaagaaagacgtaaagaacat
cttaaatcaggtggacctcgtttatcttttggtaatgatggagaagatggttcttctggg
ttcaaacctcgtaaaagtttattatctcaacaagtcaaacttgcacctttgctttctgcc
gagaatgaagtgaaagaatctgttgtcacatattcctcggattacctagaaatgctcaaa
gcttcaactcctagtcgaggtcctaaacccgccactgtcgagattgagaatggggaggac
aatgctgaggatgaagattctacgggattatcaagattggctcgggagaaatactctagt
aaaatcgtggaagattccacggttggtatacctgatgcggcggcgatagccagtgcaaag
atgaaaagacaagctgctgttggaagtcaacaacgggggttgggggacattggggaggat
tatatttctttaggtggaacacaaatggcagtttacgatggtgataaaggacctcatcct
gagagtaggttgatgagagaagaggatgagggtgaggaaggagatgaaggacttgcagat
tatacagaagagaatgagaagatatacttgggaaagaatgccaataaagtagcggctaga
agacataaaggcgagatgaatgaactcatcgcggaaagtagagaagcagaagatgaagat
gacgaagaaactagagaatgggaagaagcacaagcacgtcgagctggtcgttgggaagaa
caagtcccagagaagaaagtacaaaaaggatatcaaccagctcctatcccacgtatacgt
ccaatgcctaccatctcagctgctcaagcaagagttgcaaaagctctttctcaactccaa
gcgcagaaagcacaggacgaagctaatctcgaagttgtcgtaaaggaacttgctactttt
gaaagtcaagaacgtgaactacgttctgaagtggaacgtttggaggggaaacgtgaatgg
gttgaagagtttcgagggtgggtggagatgttaggaaatttcttagaagataaagtaccg
aaattggaagagattgaaaaggatgctttacatcattacaaagaacgttctcgaattatc
tctcagaggagggagttagatgatcaagatgatctcgctttatgttttggtattccccga
ccgacagaagtcactcaagtggacgaattaggaagagaaagggatatgttggcagaagca
ggtccaagttcggtaacacgtcgagcaagaagagatgaaagacaattacgtagaagtcgt
cgtaaagaacgttcatttcgacaagtaaagccatcggtagaagaggaagaaggtttctcg
acggattcaactttggcagaaggggatatggaggattaccgtacagcgttggtggaccta
gataagagggttaggggtttattggatgatgtaaaagcggaagattttaaagatccaaat
ttaggtttagccgtaagattcgcagattggagaaagaggtatgaagaggagtatgtgaat
gcgtttggaggattaggtttggtacatgcttgggaattttgggctaggggtgagatggtg
ggatgggaaccttttcgttcttccgaacctatacattcgttccactggttcacttcaatc
tataaatacaaccgaccctcttcaatcacacaattagaagatgaaatggaagatgaaatt
ccattaggaccagaaggtgatctcatacctgaattaatctccaaagtcgtcgttccactc
ttggtgaacatgtttgagaatggagcttatgatcctcattctagtaaacaaactcggaga
gctggagatttgttggatatgataggagagttgatagggaaggagaataagaagtttcaa
tctttactcaaagcccttctggaaacatatcatacccatctactctccctttcccacctc
atatcttctagttctcaacatgattccatccctccacctactttctccccggaatcacgt
ttatcaatggaacggttcctccgacgtcgtctgaaactccttcggaacatcttacaatgg
cgtcatgtggtccctttcgaaatacgtgaattgtgtgctcgactggtaggagaagtacta
cgtcctatcttatcgcgcaattgggatggaggagggagagaaatggctttaaaggtgtta
cagatttcagcgggtatattaccatctgatttacaaagttttttgttgactggaccattg
gtaaagtaa
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