Tremella mesenterica: TREMEDRAFT_27740
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Entry
TREMEDRAFT_27740 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14798
protein LTV1
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_27740
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
TREMEDRAFT_27740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LTV
Motif
Other DBs
NCBI-GeneID:
18491797
NCBI-ProteinID:
XP_007002387
JGI:
Treme1_27740
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MASKSIFRQPGAQHFQLVHRSLRDPLIDDPDAPQRVLKAVDRPNEKKSTYTLADLETTLD
KKQVRDNEGEAALYGITYDDSSYDYMAHLRPIGAPGASEVVLIPGPRGSGVAKGMKTQAR
GKGKGKDDELFDLLPPEVLPGPDSKTMQEVWASQEAVPPELQGLQPDMDPHLRQVLEALE
DDAFVDDEGDGEWFEELVKGGEAKDGRRAEYEFVEWGAEKDEKRADKREEKGGGEGTWEN
MMKAFKSERKPSGSDEEESEMADTVGSLASNMKDMMVLGGKKRRGKRGPSDATGMSMSSS
SMWRNEGLRTLDEQFDQLGKQYELDEEDFPDDVSVAASTMTSMTGLSTSSRLSLLSHASR
APPPPPELTRDDFEAIMDDFLDNYEILGSHMRPSLGSTSLTGPEKLRVLRNAIDSDEGVG
KEENRRRIMELERITREYQKEDRDKLPMREIVGKDRDQWDAQTIISTYTNTENHPAVIRT
KRPSEMKKAAAINFSSQDSHPRADHQEDDESDSGSETERETPTTITRIKGETTQERKARK
SAVKADRASRRQEKREHRETFSSERKRQLNAHKRLVGGGKAADLNIVSRGVLSLS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaaagcatattccgacaaccaggagcgcaacactttcagctcgtccacaga
tccctaagagatcccctcatcgatgaccccgatgctcctcagcgagtcctcaaagcagtt
gacagacccaatgagaagaagtccacttacaccctcgcggacctcgaaacgacactggac
aagaaacaagttcgagacaatgaaggtgaagcagcgttatacggtatcacatacgatgat
tcctcttacgactatatggctcatcttcgacctatcggtgctcctggtgcatccgaagtc
gttctcatccctggtccaagagggtctggagttgcaaaggggatgaaaactcaagctcgt
ggaaaaggtaaaggtaaagatgatgagctctttgatcttcttccaccagaggttctgccc
ggtcccgacagtaagaccatgcaggaagtatgggccagtcaagaagctgtacctcctgaa
ttacaagggttacaacctgatatggaccctcatcttagacaggtgctcgaagcattggag
gacgacgcttttgtggatgatgaaggggacggggaatggtttgaggagttggtaaaaggt
ggagaagcgaaagatggacgaagagctgagtacgagtttgtagaatggggtgctgagaag
gatgaaaagagggcagataaacgggaagagaaaggtggcggagaaggtacttgggagaat
atgatgaaagctttcaagtctgagaggaagccaagtgggtcggatgaggaagagagtgaa
atggcagatacggtaggttcgttggcttccaatatgaaggatatgatggttcttggagga
aaaaagagaagagggaagagaggtccttctgatgcaactgggatgagtatgagttcttcg
agtatgtggaggaatgaagggttgaggacgttggacgagcagttcgatcagcttgggaaa
caatatgaactcgacgaagaagatttccccgatgacgtatccgtagcagcatcaacaatg
accagtatgactggtctctcaacttcatcccgtctttcactcctctctcacgcttcccgc
gctccacctccacctcctgaattgacaagggatgacttcgaagctataatggatgatttc
cttgataattatgaaatccttggatcgcacatgcgtccttcccttggatctacttctttg
accggtcctgagaaattacgagttttgaggaatgccattgattctgatgagggagtgggg
aaagaagagaatagaaggaggatcatggagttggaaaggatcactagggagtatcagaaa
gaagatagggataaattacctatgagggagatagtgggtaaggatagagatcagtgggat
gctcagacaatcatctcaacatatacaaacacggagaatcatcccgcagtcatacgaacc
aaacgaccctccgagatgaaaaaagctgcagctatcaatttttcttcccaagactcccac
cctcgggcagaccatcaagaagatgatgaatcggattcaggtagtgaaacggaacgtgaa
acacctacaacgataactcgaataaaaggagaaacgacacaagaacgtaaagctagaaaa
tcagctgttaaagctgatagagcttcaaggagacaagagaaaagagaacatcgtgaaact
ttttcgagtgaaaggaaaagacaattgaacgctcataagaggttggtaggaggtggtaaa
gctgctgatttgaatatcgtttcgagaggtgtactttctctcagctga
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