Tremella mesenterica: TREMEDRAFT_28117
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Entry
TREMEDRAFT_28117 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14849
ribosomal RNA-processing protein 1
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tms01009
]
TREMEDRAFT_28117
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_28117
Protein phosphatases and associated proteins [BR:
tms01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
TREMEDRAFT_28117
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
TREMEDRAFT_28117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop52
MMS19_N
Motif
Other DBs
NCBI-GeneID:
18491836
NCBI-ProteinID:
XP_007002426
JGI:
Treme1_28117
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MTATSAKKLKGKSREVLEESIEAEIPAGKFLVHTDKKIRDKAFKGLVAFLSQGSGKISEM
EMTKLWKSLFYCFWMSDKPLVQQAFANDLAELLLLINPSSELENQDRNMDRFQASIDFLN
GFWEAIVREWHGLDRLRIDKYLLLIRRYVNATFRLLARENWSISSVEAVNSILGGPHGPL
TWQDRKVPAGLANHLADVYLEELDKVLALPEVTSKSLCPLVLILQPHITLLARTPTPTIH
SRLMMALFHPLLSALNRASPIGEEHSEGEEPSAKRAKRDEPIYAHIIMHSTDGRELAGAE
IGPGAGALKVAILKAMFSAASDEHAVESNRRRVYVVWREENGDDD
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgacatcggccaagaaactgaaaggcaagtcgagggaggtcctggaagagtct
atagaagcggaaataccagcaggaaaatttcttgtgcatacagataagaaaatcagagat
aaagctttcaaaggtttagtagcttttctctctcaaggttcgggaaagatctcagaaatg
gagatgactaaattatggaagagtttattttactgtttttggatgtcagacaaaccttta
gtccaacaagcttttgcgaatgatttagccgaattgttattactcatcaacccttcttct
gaacttgagaaccaggatagaaatatggatcgttttcaagcttcgattgatttcttgaat
gggttttgggaggctatcgtacgggaatggcatggtcttgaccggttaaggattgataaa
tatctactcctcatcagacgatacgtcaatgccacctttcgtctcctagctcgagaaaac
tggtcgatatcgtctgtggaagctgtgaattctatcctcggtggaccacatggccctctc
acatggcaagatcgtaaagttcctgctggtctagcgaaccatctggcggatgtatatttg
gaagaacttgataaggttttggctttaccagaagtaacttcgaagtctctttgccctttg
gtcttaatccttcaacctcatattacccttctcgctcgaactcctactccaacaatacat
tcacgtctcatgatggctctcttccatcccctcctatcagctttaaaccgggcttcaccc
atcggtgaggaacactccgagggagaggaaccatctgccaaacgagcaaagagggacgaa
ccgatctacgcacatatcatcatgcattccaccgatgggcgagaattagcaggagccgag
ataggaccgggggcaggagctttgaaagtagcgatattgaaggctatgttttccgctgct
tctgatgaacatgcggtagagtcaaatagacggagagtgtatgtagtatggcgtgaagaa
aacggggatgatgactag
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