Tremella mesenterica: TREMEDRAFT_28670
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Entry
TREMEDRAFT_28670 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K12190
ESCRT-II complex subunit VPS36
Organism
tms
Tremella mesenterica
Pathway
tms04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
TREMEDRAFT_28670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_28670
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tms04147
]
TREMEDRAFT_28670
Membrane trafficking [BR:
tms04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
TREMEDRAFT_28670
Exosome [BR:
tms04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
TREMEDRAFT_28670
Exosomal proteins of colorectal cancer cells
TREMEDRAFT_28670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36-NZF-N
zf-Sec23_Sec24
DZR
Motif
Other DBs
NCBI-GeneID:
18491892
NCBI-ProteinID:
XP_007003201
JGI:
Treme1_28670
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MRSSAKITLALGPPNPSTTTSTGNGEPVKSVSIDTYTDQGWTCGVCGYSNPTDVGMGKCG
LCGVPYSVSQAAMSSFSQGPSRTSTPTPRPISTMSATAPPEISQISSEITTSLEEGIPCP
ACTFLNHTSMTFCEICSTRLKTSTSRKANITGPDMSDPSGGRSQSKQEVVRLSFRGGGEK
VAYQKLKSVLTQKAWEKSQKTRRDKENGEVKSGAGIDGIMNTLSLDAKEQEEHVKESFRD
LELLMVRAGEMVRLAQSLSAKLSASSSPSESETSLIHNSLVQLGLPAPALTPDMVSTDRA
YHTGLAKELAHLLLGKTGDGGLMNQVGRGVIGLDEVWGFWMRARGVALLPPSTLISVLPY
LATQTSIRDLTLPSGLRVLHTKSYDPISILHRILVLLTPSAHSPSSELMEHIELLQIPES
SSISVTLGDEPSRVGGTQLDSTEIKGLVRDDQAQGGVRWYRDLITPWML
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcttcggcaaagataacacttgctctcggtccacccaatccatcgactactacg
tccactggcaatggtgaacccgtcaagtctgtgtctatagacacgtacaccgatcaagga
tggacgtgtggggtttgtggttactccaatccgactgatgtgggaatgggtaaatgtgga
ctttgcggagtcccatattctgtctcacaagctgctatgtcaagtttctcccaaggacca
tcgaggacctcgacgccaactcctcgacctatatcaaccatgtctgccacagctcccccg
gaaatctctcagatttcgagcgaaatcactacatcgctggaagagggcattccttgtcca
gcgtgtacttttctgaatcatacatctatgaccttttgtgagatatgctctactcgactg
aagacatcaacatctcggaaagcaaatatcaccgggcctgacatgtcggacccaagtggc
gggagaagtcaaagtaagcaggaggttgtacgtctaagctttcgcggtgggggagaaaag
gtggcgtatcagaaattgaagagtgttttgactcaaaaagcctgggagaagtctcaaaag
acaagaagggacaaggagaatggtgaagtcaagtcgggggcgggtatagatggaataatg
aacactctatcactcgacgcaaaggaacaggaagaacatgtcaaggaatctttcagagat
cttgaactgctcatggttcgtgcaggagagatggtccggttagctcaatctctcagtgcc
aaactttcagcctcctcctctccttcagagtccgaaacatctctcattcacaattctctc
gtccaacttggccttcccgcacccgctttgacacctgatatggtctctacggatcgagcg
tatcataccggtctagccaaagaactggcacatctcctccttggtaaaacaggtgatggg
ggtttgatgaatcaagtaggtagaggtgtgataggtttagatgaagtatggggtttctgg
atgagagctaggggtgttgctcttcttccaccttcaacactcatctccgtccttccttat
ctagccactcaaacttccattcgtgatttgactcttcccagtggtctaagagtattacat
acgaaatcatatgaccccatttctatccttcatcgtattctcgtacttctcactccctct
gctcactctccttcttccgagttgatggaacatatcgaattgttacaaatacccgaatca
tcttctatcagtgttacattaggggacgaaccttcgagagttggtggaacccagttggat
tcgacggaaataaaaggtttagtaagggatgatcaagctcaaggaggtgttagatggtat
cgagatcttatcactccttggatgttatga
DBGET
integrated database retrieval system
