KEGG   Tremella mesenterica: TREMEDRAFT_28739
Entry
TREMEDRAFT_28739  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K12897  transformer-2 protein
Organism
tms  Tremella mesenterica
Pathway
tms03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TREMEDRAFT_28739
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tms01009]
    TREMEDRAFT_28739
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tms03041]
    TREMEDRAFT_28739
Protein phosphatases and associated proteins [BR:tms01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     TREMEDRAFT_28739
Spliceosome [BR:tms03041]
 Common components
  Common spliceosomal components
   SR proteins
    TREMEDRAFT_28739
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded
Other DBs
NCBI-GeneID: 18491902
NCBI-ProteinID: XP_007003211
JGI: Treme1_28739
LinkDB
Position
Unknown
AA seq 165 aa
MSVDTYIPIPRTPTPEPRERRDSHEIIGRRRSEPIREALNPPPPRPRNAPQRVEPNRVLG
VFGLSVRTRESDLEDEFMRYGDVEKVVIVYDQRQSDRSRGFGFITMRTVEDAERCIEKLN
GLMLHGRAIRVDFSATQRPHAPTPGEYMGVKRPPSEFISDIGHDL
NT seq 498 nt   +upstreamnt  +downstreamnt
atgtccgtcgacacttacattcccattccacggacacctactcctgaacctcgtgaacga
cgtgattctcacgaaattattggacggcgtcgatcggaacctatcagggaagctctcaac
ccgcctcctcccaggccccgaaacgctcctcagcgtgtcgagccgaacagggttttggga
gtgttcggtctatctgttcgtactcgcgaaagtgaccttgaagatgaattcatgcgttat
ggtgatgttgagaaggttgtcattgtatatgatcagcgacagtcggaccgttcgagaggc
ttcggtttcatcaccatgcgaaccgtcgaagatgccgaaaggtgcatcgaaaagctcaac
gggttaatgcttcatggtcgtgccattcgagtggatttttctgccactcaaagaccccac
gcgcctaccccaggagaatacatgggtgtcaagaggcctcctagtgagtttatcagtgat
attggccatgacctttga

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