KEGG   Tremella mesenterica: TREMEDRAFT_28751
Entry
TREMEDRAFT_28751  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K03872  elongin-C
Organism
tms  Tremella mesenterica
Pathway
tms04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    TREMEDRAFT_28751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tms04121]
    TREMEDRAFT_28751
   03400 DNA repair and recombination proteins [BR:tms03400]
    TREMEDRAFT_28751
Ubiquitin system [BR:tms04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     TREMEDRAFT_28751
   Cul5 complex
     TREMEDRAFT_28751
DNA repair and recombination proteins [BR:tms03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     TREMEDRAFT_28751
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 18491904
NCBI-ProteinID: XP_007003213
JGI: Treme1_28751
LinkDB
Position
Unknown
AA seq 104 aa
MANDDDYVLLESNDGFKFVVSRKVACGSGMLKSMLDDEAAFSESRSKVCHLDYRGIILLK
VIEYLSYKVQYADFNSEDIIEDFADRIDPYIALELLTAADFLDT
NT seq 315 nt   +upstreamnt  +downstreamnt
atggcgaacgatgatgactacgttcttcttgaatcaaacgatgggttcaagtttgtcgta
tcgcgtaaagtggcttgtgggagtggaatgttaaagtcgatgttagatgatgaggctgct
ttctctgaatcaaggagtaaagtctgtcatttagactatcggggtatcatactactcaag
gtcatcgagtatctgtcgtacaaagttcaatatgcagatttcaattctgaagatattatc
gaagatttcgcagatcggatagatccttatatcgcacttgagctattgacggctgccgac
tttctcgatacatag

DBGET integrated database retrieval system