Tremella mesenterica: TREMEDRAFT_29140
Help
Entry
TREMEDRAFT_29140 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tms
Tremella mesenterica
Pathway
tms03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TREMEDRAFT_29140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_29140
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_29140
Messenger RNA biogenesis [BR:
tms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TREMEDRAFT_29140
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
Pre-60S particles
RNases
TREMEDRAFT_29140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
18491958
NCBI-ProteinID:
XP_007003267
JGI:
Treme1_29140
LinkDB
All DBs
Position
Unknown
AA seq
214 aa
AA seq
DB search
MSRSSPFTYDDGPLVWIDCEMTGLDATRDQLLEIAVIITDGKLNPVDEGIDYVIRTEEAV
LDSMGEWCVEQHGKSGLTAACLSSPHTHQEVEKTVKEYIMRWIPEPGAGLLAGSSVHLDK
AFLVRYMPSITDHLSYRILDVSSIKEICRRWYPSIRKKESDSREGEVAHRALDDIQGSIR
ELKFYRDHIFPPLEPVPYSTPAASTVSSAEEATI
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgatcatcgcctttcacatacgatgacggtcctttggtgtggatcgactgcgag
atgacgggcctggacgcgacgagagatcaattattggagattgctgtgatcataaccgat
gggaagctcaatcctgtcgatgaggggattgactatgtcattcggactgaggaggcggtg
ttggacagtatgggggaatggtgtgtcgaacaacacggcaaaagcggtcttactgccgca
tgcctctcttcgcctcatacgcatcaagaagtcgaaaaaacggtcaaggagtatataatg
agatggatacctgagccaggagcggggttactggctggtagctcggtccatcttgataaa
gcgttcttagtccgctacatgcctagtatcaccgatcatttgtcataccgcattctcgac
gtcagctctatcaaagagatatgtcgaagatggtatccctcaattcgaaagaaagaaagt
gatagtcgggaaggagaggtggcacatcgagccttggacgatatccaaggaagcatacgg
gaactcaaattctacagggatcacatcttcccacctctcgagcctgtaccatattccact
cccgcagctagcacggtttcgtcagcagaagaagcaaccatatag
DBGET
integrated database retrieval system
