KEGG   Tremella mesenterica: TREMEDRAFT_30126
Entry
TREMEDRAFT_30126  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K08735  DNA mismatch repair protein MSH2
Organism
tms  Tremella mesenterica
Pathway
tms03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    TREMEDRAFT_30126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tms03400]
    TREMEDRAFT_30126
DNA repair and recombination proteins [BR:tms03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     TREMEDRAFT_30126
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I Bap31_Bap29_C Med20
Other DBs
NCBI-GeneID: 18492062
NCBI-ProteinID: XP_007003893
JGI: Treme1_30126
LinkDB
Position
Unknown
AA seq 948 aa
MRLDKAGEDQFCRFVDRMPEKPDGMIRLFDRGDYFSAHGSDALIVAHQVFKTTNVIKYLG
SSSLSSSIPSTSKNTSMTPRGLPSVDISTNLTKAFLRECLTTRQMRVEIYIPEDGTGGRK
NHYKWILGKVASPGNIEQVEDLIFDNEDLDSNAVSMALKLHMVQGIRTVGCAFLDVQEKT
LGVSEYVDDANFGNTESLLIQLQVKECILPSDEKRADVELTKLRTMIDRCGLVITERRSA
DYKAGNIEQDVSRLLDGGHTSTTLPEFDLKLAMSSLAALLVYTNLVTSPQYEHQFRLYRH
DLTQYMKLDASAVKALSLMPNPQELGGGRNMSLYGLLNQCKTSQGQRLLGRWLKQPLVNL
HEIRQRQGIVEAFVDDALARQTLQEQFLSRMPDFHRISKKLHRNVASLDEVVRVFYAIQL
IGPMIEVLETLNTSEENKQLIATIYVIALRDHEDKLTTYSQMVEDTVDLNDKTSHNHVLQ
ASFDPKLEEYKTQLMAVRSALDEEHAKVGEELGLDIGKKLHLERHQVYNYSFRITKAEAG
LIRNKKQYRDLATQKSGTIFTTATLKGLSEDYDRLMDKYNDKQRTLVKEVVSIAASYTPV
LEALDNLIAAIDVTVSLARVSANANTPYVRPVLFEKGKPTHVIVRGARHPCLEVQDDVSF
IANDHEMKKGKCEFVVLTGPNMGGKSTYIRQIGVIALMAQIGCFVPADEAQLPVFDCILA
RVGAGDSQLKGVSTFMAEMLETATILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEHI
ATKIRCFCLFATHYHELTALNQTQPHVKNLHVEAHVQPIKGGKSKQDRDITLLYKVTEGI
CDQSFGIHVAELAQFPESIIKLAKRKAEELEDFGDGANDESLNKYSETETDQGAALMQEF
LQTWKSRAEVSLEELSEEGQVGLLRKTATEFKERFEGSPWIMGVLKEV
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgaggttagacaaagctggagaagatcaattttgtcggtttgtggaccgtatgccagag
aaacctgatggtatgatcagattgtttgatcgtggtgattacttctcagctcacggttcc
gacgcactcatcgtcgctcatcaagtattcaaaaccacaaacgtaatcaaatacctcggt
tcatcttcactatcatcttccattccgtccacatctaaaaatacttccatgactcctcgt
ggacttccttccgtggacatctcaaccaatctcaccaaagccttcctacgtgaatgtctc
acaactagacaaatgagagtagaaatatatattcctgaagatggaacaggagggaggaaa
aatcattacaaatggatcttagggaaagtggccagtcctgggaatatagaacaggtcgaa
gatctcatatttgacaatgaggatttggatagtaatgccgttagtatggctttgaaactt
catatggttcaagggatcaggacggttggatgtgcttttctcgatgtgcaagagaaaact
ttgggggttagcgaatatgttgatgatgccaattttgggaatacagagtcactccttatc
cagctacaagtcaaagaatgtatcctcccctctgacgagaaaagagccgatgtcgaactc
acgaaactccgcacgatgatcgaccgttgtggtctggtcatcaccgagcgaagatctgcc
gattacaaggccggtaatatcgagcaagatgtctccaggctcctggacggaggtcataca
agtacgactttacccgaattcgatctgaaactcgccatgtcgtcccttgctgccttactg
gtatacaccaatctcgtaacttcaccacagtacgaacatcaattccgactatatcgacac
gatctcactcagtatatgaaacttgacgctagtgctgttaaagctctttctctcatgcct
aaccctcaggaactcggaggtggtcgtaatatgagtttatacggtttattgaatcaatgc
aaaactagtcaaggacaacgtttattgggaagatggttgaaacaacctttggtaaaccta
catgagatccgacaacgtcaggggatagtggaagcatttgtggatgatgccttggccagg
cagactctgcaggaacaattcctaagtcgtatgccagattttcatagaatatcgaagaag
ctacacaggaacgtggcgtcattagatgaggtcgtcagagtcttctacgcgatccaactc
atcggtccaatgattgaagttctcgaaactctcaacacgagtgaagagaacaaacagctg
atagctaccatctatgtcatcgctttgcgtgatcacgaagacaagttgacgacttattct
cagatggtagaagatactgtcgatctgaacgataagacaagtcacaatcatgtcttgcaa
gcttcgtttgatcctaagctcgaggagtataagacacagttaatggcagtgagatctgct
ttggatgaagaacatgcaaaagtcggggaagagttggggttggatattgggaagaagctg
catttggaaagacaccaggtttacaattattcttttaggattactaaagctgaagctggt
ttaatccgcaacaagaagcaataccgagatctggcaacgcagaagagtgggaccatattt
accactgccactttgaaaggcttgagcgaagactacgatcgacttatggacaagtataac
gataaacaacggactttggttaaggaagtagtctccatagcggcatcttacactcctgta
ttggaagcgctcgataatctcatagctgccatcgacgtgactgtcagtttggctcgtgta
tccgcgaacgcgaatactccatatgttcggccagtcttgtttgagaaaggtaagccgact
catgttattgtgcgcggagcgagacatccttgtttggaagtacaagatgacgtttcgttt
atcgccaatgatcatgagatgaaaaaaggtaagtgcgaattcgtcgtccttaccggaccc
aatatgggcggaaagtcgacttacatccgacaaatcggtgtcatagccttgatggcccaa
ataggatgtttcgtacctgccgatgaagctcaactacccgtgttcgactgtattttggcg
agagtcggagctggggattcacagttaaagggtgtgtcgactttcatggctgaaatgttg
gagactgcgactatcctgaggtccgcaacgaaagactccctgattatcattgatgagctc
ggtagaggtacatcgacgtatgacggtttcggtctagcgtgggctatctccgaacatatc
gccactaaaatccgttgcttttgtcttttcgctactcattatcatgaattgacagctctc
aatcagactcaaccacacgtcaagaatcttcatgtggaggcgcatgtccagccgatcaaa
ggaggtaaaagtaagcaggatagagatatcactttgctttataaggttaccgagggcata
tgcgaccaaagttttggtattcacgttgccgagttggctcagtttccagagagtatcatc
aagttggccaagcgaaaagcggaagaattggaagacttcggcgatggcgcaaatgacgaa
agcttgaacaaatactcggaaactgaaacggatcaaggtgcagctttgatgcaagaattt
ctacagacgtggaagtctcgtgccgaagtgtctttggaggagctgagtgaggaagggcaa
gtgggattgttacgaaagacggcgacggagtttaaggaacggtttgagggaagcccttgg
ataatgggtgtgttgaaagaggtatag

DBGET integrated database retrieval system