Tremella mesenterica: TREMEDRAFT_30693
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Entry
TREMEDRAFT_30693 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
tms
Tremella mesenterica
Pathway
tms03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TREMEDRAFT_30693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_30693
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TREMEDRAFT_30693
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
ASA1
Motif
Other DBs
NCBI-GeneID:
18492138
NCBI-ProteinID:
XP_007004451
JGI:
Treme1_30693
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MPSKQPVAGPSRPKLSTATQAPPPPSVSGFNSSRTQCAMALPVLGSADKVTVWDITNNRV
VSEWQVEGAAKVATLCWASTPSPTRRRKRKNKANESHVIDEEVLVIATQNEAVIFSPSRS
EVVQRLSLSTPVTAAWSDDRRVLLSTVSSLLVLSPDLSSISSTIPFSSGIASPTAVAILP
SSSRTTLHVLVANTSISCIHVDLESAQVTHTSSPLPASTSTVSSILPLPFSPVGYSFLVV
SEDDRIVSQYTLKTPTAPLKLSYRFASPILSPAHSVALSPTYLSVLHSSGEISVFPVPTE
LDLVRPKSDSNPSSVKVVEGKDERQARVCRLTFAPDSETPSTLLCGRLTGGGRVTWHRAV
LEHPEGGLKKLVTVKCEAQDLVNVNGSVNNIAPHRFAAPTGVVEAPPDDIEDETSARLPN
DVHVADLSLGERLLALPDAAAAPIVNGDAAPTKAISAPVGPVNASSLTRLLVQALHTSDP
ALLAMCLAHRNPTLVRNTIRKMPAQLALPLLKACVERLGQGKGANKRGGGRGVSQSEQQA
RGTVEWVKGVLVERGALLMTMPSLPIHLAALSQLLSARLQLYQPLLSLSGRLDLALTQIT
MRRLATQQGQGHIGGDANEAVRYVEGESDEDEIPIEASHDDEVENIGILMNGTANAQDDQ
ESDEEEEDDSDDDVLTSDSEDGRSEVVEGVEESDEEGLSEED
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgccctccaaacaacccgtggccgggccatcccgccccaaactttccaccgccacccaa
gcacctcctccaccttcagtctccggtttcaactcctcccggacacaatgtgccatggct
ttgccagtccttggctcggccgacaaagtcaccgtttgggacatcacaaacaatcgtgtt
gtgtctgaatggcaagtcgagggtgctgccaaagtcgccacactctgttgggcatcaacg
cctagtcctaccagacggagaaagagaaagaacaaggccaatgaatctcatgtaatcgac
gaggaagttctcgtcatcgccacgcagaatgaagccgtcatcttctcacccagccggtcg
gaagttgtacagcgcttatctttgtcaacaccagtgactgctgcctggtccgacgatcgc
agagtcttattgtccacggtctcgtcactgctcgtgctgtcacctgacttgtcttccatc
tcctcaactatccctttttcatcaggtatcgcctctccgacagcagttgccattctgccc
tcttcctcccgtactaccctacatgtcctcgtcgccaacacttccatttcttgcattcat
gtagacctcgaatctgcccaagtcacacacacctcgtcacctctacctgcgtccacatct
accgtctcttccattctacctctccctttttcaccagtcgggtattcattcctcgtcgtg
tcagaggatgaccgaattgtctcccaatatactctcaagacgcccacagcgccgctgaaa
ctatcataccgctttgcctccccgatcctttcacctgctcactctgtagccctctcacct
acctatctatcggtgctgcactcttcgggcgagatttctgtctttcctgttcctactgaa
cttgacctcgttcgaccaaaatccgattccaacccttcttccgtcaaagtggtagaaggc
aaggatgaacgacaagctcgagtctgtcgtctcacgtttgctcccgactcggagacccca
agtacgctgctttgtggacggctgaccggtggcggccgtgtcacttggcatcgtgccgtc
ctcgaacacccggaaggggggttgaaaaaattggtcacggtcaaatgtgaagctcaagac
ctggtcaatgtcaatgggtcagtcaataatatcgcccctcatcgtttcgctgctcccacc
ggtgtggttgaagctcctcccgatgacatcgaagacgaaacctctgctcgattgccgaat
gatgtgcatgtagccgacttgtccctcggtgaacgtttgttagctcttccagacgctgcg
gctgcgcccatcgtcaatggggatgcggctccaaccaaggccatctctgctcctgtgggc
ccagtcaacgcttcttctttaactcgacttttagtccaagcgctgcacacttccgaccct
gcgctactggccatgtgtcttgctcatcgcaatccgacgctcgttaggaacacgatccgc
aaaatgcctgctcaattggctcttcccttgctcaaagcatgcgtcgagcggttggggcaa
ggaaagggtgccaacaaacgcggcggtggaaggggtgtctctcagtcggagcaacaggct
aggggtaccgtagagtgggtcaaaggtgtgctagtagaacggggagcattgttgatgact
atgccatctttacccatacacctggctgcgctctctcagcttctgtctgctcgtctgcag
ctgtaccagcctctcctctcattatcgggtcgactcgacctcgcgttgactcaaattacc
atgcgacgtctcgccactcagcaagggcagggacacatcggcggtgatgccaacgaggca
gtacggtacgttgaaggcgagagcgatgaggacgagattccgattgaagcaagccatgat
gacgaggtcgaaaacattgggatccttatgaatggcaccgcaaacgcgcaggatgatcaa
gaatccgatgaggaagaagaagatgatagcgacgacgatgtactcacgtcagattcagag
gacgggcgaagtgaagttgtcgaaggtgtggaggagagcgatgaggaaggtctatccgaa
gaggattaa
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