Tremella mesenterica: TREMEDRAFT_31565
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Entry
TREMEDRAFT_31565 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K13346
peroxin-10
Organism
tms
Tremella mesenterica
Pathway
tms04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TREMEDRAFT_31565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tms04121
]
TREMEDRAFT_31565
Ubiquitin system [BR:
tms04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
TREMEDRAFT_31565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_5
zf-RING_2
zf-C3HC4_3
Prok-RING_4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
TRAF3_RING
zf-rbx1
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
18492244
NCBI-ProteinID:
XP_007004960
JGI:
Treme1_31565
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MDPGPSRQPLLPPPLQSVVNVQEDRLSFPPASQAQILRAQQRDSSQIHRLTELAAELLRS
LFGTRWLAHRQTIVDLTTRAVYLFLTLGRGQQTLGEEYTDIVPFASKSRRLPSRTRRMVT
IILLLIPSILTSPSTITYLRNDDSRWCRTKRSLADVLESPWARIGAELHLVAFLLRGRFF
DLARRLTGMTYISTLPARPPEQTPSYEPLGLLLLIALLNRLISTRMRAQSDPITPPPNLA
FSSVPLSSLPLSPPLTPPPNNEVVLLSARTKDYDRPNTYLSPSAQILSGRQCTLCLEPRG
TGEGSGGTVGVTECGHVFCWGCLGGLDKRECPLCRQGLRMERLVAAYNL
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggacccaggaccatcaagacagcccctcttacctcctccccttcaatctgtagtcaat
gtacaagaagatcgtctctcgttcccgccagcgtcacaggcccagatcttgagggctcaa
cagagggacagttctcagatccaccgattgacagaattagctgcagagcttctcagatct
ttgttcggaacaagatggctcgcacatcgtcagaccatcgtggatctcactactcgagcc
gtgtatctcttcctcacccttggtagaggtcaacaaacactaggagaggaatataccgat
atcgtgccttttgcctccaagtcacgacgattaccttcccgtacgcggaggatggtcact
attatactactgctaatcccttccatcctcaccagtccgagtactatcacatacctcaga
aacgacgattcgaggtggtgcaggactaagagaagtttggcggatgtattagagtcgccg
tgggccagaatcggggcagagttgcatctcgtggcgtttctcttaaggggtcggttcttc
gaccttgccaggagactgacaggaatgacatatatctccactcttcctgctcgaccccca
gagcaaacaccttcctacgaacccctaggactgcttctgttgatagcccttctcaaccgt
ctaatctctactcgtatgcgtgcccaatctgaccctatcacacctccaccgaacctcgct
ttctcatcagtaccactctcctcacttcccctatcccccccactgacccctccaccgaac
aacgaagtcgtcctattatccgctcggactaaagactacgatcgacccaatacatatctc
tctccctccgctcaaatcctgagcgggagacaatgcactctgtgcctcgagccacgcgga
acgggggaaggaagcgggggaacggtaggagtgaccgagtgtggacatgtgttttgctgg
ggatgtctgggcgggttggataaaagagaatgccctttatgccgccagggtcttcggatg
gagcggttggtagccgcttataatctgtag
DBGET
integrated database retrieval system