Tremella mesenterica: TREMEDRAFT_31892
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Entry
TREMEDRAFT_31892 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
tms
Tremella mesenterica
Pathway
tms03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TREMEDRAFT_31892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tms03032
]
TREMEDRAFT_31892
Enzymes [BR:
tms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TREMEDRAFT_31892
DNA replication proteins [BR:
tms03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
TREMEDRAFT_31892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
18492281
NCBI-ProteinID:
XP_007005309
JGI:
Treme1_31892
LinkDB
All DBs
Position
Unknown
AA seq
1468 aa
AA seq
DB search
MASNRADRFAALKKARKEGGRLSQWKPGDGEIYDTVSDEQYRSIVGDRLEKDDFIVDDDG
NGYVDNGVDDWEDEREEESSEDEDHFEGEDEELRKARKLKKAKARARAQKKSTSSKPKPK
SALSDYARPIQSTSTYRPAPSAIAEDDFMASLLSSVTSVPSVPSQPAFLSDTRKRKSSPD
IPMYSSDGIEPSSEESFFSKKRYGDSSDVEEEPRMTMTIGNKKKPRISEMTIVPDKDMEM
DMHMETVVKEERISDDEDEGIKVQSKPLAQSKINGNSTRRKMVNSTSVKVKQEIPVVHGV
GKEVETKEEETPSKVGLKKIIPGATHWSSLSETLAPKTQELETVTAPVGSIKQENVLEED
GTLRMFWLDFIEQDGVVHLVGKVLDRQSGKYVSACVSVNGIQRNLFVKPRPKRFSGGHET
DLEVTKTDVYQDFDKARQKAGVEEWAAKFVQRKYAFEEKDVPKGESEWLKVVYGFDQPEM
PMDCQGPTFSRVFGTNTSAFELLVIKRKIMGPCWLEIKGPVLSTKATSWCKIEFHTSSPK
NVNPLTEDAPNAPKDIPPLTITSISLRTIVNHRENKTEILCATTRTWESCNIDDPTPPDR
LPSTLNTIVRPIEKFPPNLESRAKTERSPFQTVKAERALLNSLLATIQRHDPDVIVGHNF
LGNGFEALLYRMKELKADRWSRIGRFRRKTFNISKAGNNVRLMAGRLVADLSSDAAKGMI
SSTTWSLTEMCGTHLKIQREDIDPEDTHGYFDHTLSGPEKLIKFIRLCEVDSYFQMAIAA
RVQMLPLTKQLTNLAGNSWNLTLNGGRAVRNEFILLHEFHRLKYVCPDKTFKKTRTITME
DEDEEVPMAKRGKAKYAGGLVFDPKKGLWDTYILVMDFNSLYPSIIQEYNIDFTTVEREP
VDEEGEEDKIPDVPGGEIPQGVLPRIIATLVGRRKQVKALMKDKNATAAQLQQYDIRQQA
LKLTANSMYGCLGFQGSRFSSRPLAALTTYKGREILTHTRELAESLQLDVVYGDTDSVFV
NSNVTSYPEALKIANDFKKLVNERYRLLEIDLDAVFERILLLNKKKYAAVKIDASGDKTT
EVKGLDMKRREFAKISKDASAAVLKEILSGQATEVVVEKIHEYLTSLGETVRSGGIPLED
FIIFKRLGKNPEDYPDKKSQPHVQVALRMKSKGVAVRAHDVIPYIMCLGEDGKSAKSAHA
DRAFHPDDLRRQGSELRIDFDFYLDGQILQPVLRLCESIEGTDRARLAECLGLDPTRYAT
HTGGEVTEKQFFTFESQISDKERFKDASPLSLRCIGCHSVSNFEGLLDDSSNMLQPTGLI
CPVCSSIYPTPSISVQMENQIRAHVARYYLGYTICDGEGCGARTRMMGVYGRRCLGLVKE
GCKGVVRLEYSDQKLHDQLLYFHTLFNTDKALSDTRGGAKYEELRALLIPNLQAFNQITR
VAQRYLDKNGRRFVDLKGLFGFMERVRI
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggccagtaatagagctgatagattcgcagctttgaaaaaagcgaggaaagaaggtggg
agattgtcacagtggaaacctggtgatggagagatatacgatacagtctctgacgaacaa
tatcgctctatagtgggtgatcgactggagaaagatgattttattgtggatgatgatggg
aacggatatgtcgataatggagttgatgattgggaggacgagagggaagaggagagtagt
gaggatgaagatcatttcgaaggtgaggatgaagagttgagaaaagctcgtaaactcaaa
aaagcaaaagccagagctcgagcccagaaaaagtccacctcatccaaaccaaagcccaaa
tcagctttatcagattacgcccgtccaatccaatccacctctacataccgtccagctcct
tccgccattgccgaagacgacttcatggcttcccttctatccagtgtcacttcagtccct
tccgttccttcccaaccagctttcctgtccgacacacgaaaacggaaatcttcccctgat
attcctatgtacagctcggacggaattgaaccttcttccgaagagagtttcttttctaaa
aagagatacggcgattcttccgatgtagaagaagaaccgcgtatgacgatgactatagga
aataagaaaaaaccaaggatatcagaaatgacgattgttcctgataaagatatggaaatg
gatatgcatatggagactgttgtgaaagaagaacgtattagtgatgatgaagatgaaggt
ataaaggtacaatctaaacctcttgcacaatcgaagatcaatggtaattcaacaagaaga
aaaatggttaattctacttctgtcaaagtaaaacaagaaatacccgttgttcatggtgta
ggtaaagaagtggagacgaaagaggaagaaactccttcgaaagttggtttaaagaagatt
attccaggtgcaactcattggtcctctttgtcagaaacgttggcaccgaaaacacaagag
ttggaaacggtcaccgctccggtaggaagtatcaaacaagagaatgttttggaagaagat
ggcaccttgaggatgttttggttggatttcatcgaacaggatggggtggtccatttggta
ggaaaggttttggatagacaaagtgggaaatatgtgagtgcgtgtgttagtgtgaatgga
attcagaggaatttgtttgtcaaacctagacctaaaagattttctggcggtcatgaaaca
gatcttgaagtgacaaagaccgacgtataccaagattttgacaaagctcgtcaaaaagcc
ggagtggaagaatgggcagcaaaattcgtacagcgtaaatacgctttcgaagagaaagat
gtacctaaaggagagagcgaatggttgaaggtggtatatggatttgatcaacccgaaatg
cccatggactgccaaggacccacattcagtcgagtgttcgggaccaacacgtcagcgttc
gagcttttagtgatcaagagaaagatcatggggccatgctggttggaaatcaaaggacct
gttttgagtaccaaagccacttcatggtgtaaaattgaatttcacacttcttcacccaaa
aacgtcaatcctctcacagaagatgccccaaacgcccctaaagatatcccaccactcaca
ataacatccatctctctccgaaccatcgtcaatcatcgagaaaacaaaactgagatttta
tgcgccacaacccgaacatgggaatcatgtaacattgatgatcccacaccacccgatcga
ttacccagtacgctcaataccatcgtcagaccaatcgaaaaattccctcctaatctcgaa
agcagagccaaaaccgaacgttctcctttccaaactgttaaagcagaaagagcgttattg
aactctcttttagctacaatacaaagacatgatccagatgttatcgttggacataatttc
ttaggcaatggattcgaagctttgttgtataggatgaaagaattaaaagcggatcgttgg
agtaggataggaaggtttagaagaaaaacattcaatatttccaaagctggtaataacgtc
aggttgatggcaggtagattagtagcggatttatctagtgatgctgccaagggtatgata
tcatcaactacttggtccctcactgaaatgtgcggaacacatcttaaaatacaaagagag
gatatagatcctgaagatacgcacggatattttgatcatacactttcaggtccggaaaaa
ttgataaagtttattcgattatgcgaagtggattcttattttcaaatggcaatagcggct
agggtgcaaatgttacctttgacaaaacaacttacgaatttggctggaaattcctggaat
ttgactctgaatggaggtcgtgcagtcagaaacgaatttatcttattacacgaattccat
cgtcttaaatacgtttgtcctgataaaacattcaagaaaactcgaacaatcacaatggaa
gatgaagatgaagaagttcccatggcgaaaagaggaaaagctaaatatgccggtggatta
gtattcgatcctaaaaaaggtttatgggatacttatatattggtaatggattttaattct
ttgtatcctagtatcatacaggaatacaatatcgatttcaccactgtagaacgggaacct
gtggatgaggagggggaagaagataaaatcccagatgttccaggtggtgaaatacctcaa
ggtgtactaccacgaataatcgctacactcgtaggtagaagaaaacaggttaaagctttg
atgaaggataaaaacgctactgctgctcaacttcaacagtacgacatccgtcaacaagct
ttgaaacttaccgccaactcaatgtacggttgtctaggttttcaaggttctcggttctcc
tccagacctctggcggcattgacgacttataaaggtcgagagattttgactcatacgagg
gaattggccgagtcgcttcaacttgacgtcgtatacggtgataccgattccgtatttgtc
aactcaaatgtcacttcttaccccgaagctctcaaaatcgccaatgatttcaagaaattg
gtcaatgagcgatacagattactcgaaatcgatcttgacgctgtatttgaacgtattttg
ttattgaacaaaaagaaatatgctgctgtgaagattgatgcttctggagacaagacgacg
gaagttaaagggcttgatatgaagagaagagagtttgctaagattagtaaggatgcttct
gcggcggtgttgaaggagatactctcaggtcaagcgacggaagttgtggtagagaagata
catgaatatcttaccagtctaggtgagacggtacgtagtggaggtataccattggaagat
ttcatcattttcaaacgattgggtaaaaaccccgaagattacccagataagaaatcacaa
cctcacgttcaagtggcattacgtatgaaaagtaaaggtgtcgcagtacgcgcacatgat
gtgataccttatatcatgtgtttgggagaagatgggaaaagcgcaaagagtgcacatgct
gatagggcttttcatcctgatgatttgaggcgacaggggtcagagttgagaatagacttc
gatttctacctcgatggtcaaatcttacaacctgtattgagattatgcgagtctatagaa
ggtacggaccgtgcgcgtttagcagaatgtctaggtctcgatcctacacggtatgcaact
catacaggaggcgaagtgacagaaaagcaattcttcacgttcgaatcgcaaatctcggat
aaagagaggttcaaagatgcttctccactttctttacgttgtataggatgtcatagtgta
tctaattttgaaggattgttagatgattcttcaaacatgcttcaacctaccggtcttata
tgtcccgtctgttcttccatctatccaacaccttccatatcggtccaaatggaaaaccaa
atccgagcgcatgtggcgagatattatctcggttataccatttgtgatggggaaggatgt
ggagctagaactaggatgatgggtgtttatggacgtagatgtttaggattggtgaaagaa
ggatgtaaaggtgttgtgaggttagaatattctgatcaaaaattacacgatcaactctta
tactttcatacattattcaataccgacaaagctctttcagatactcgtggaggtgcgaaa
tacgaagaattacgagctttgttgattcctaatctccaagcgtttaatcagataacacgt
gttgcacagaggtatttggataagaacggtagaaggtttgtcgatttgaaaggtttgttt
gggtttatggaaagggttagaatatga
DBGET
integrated database retrieval system