Tremella mesenterica: TREMEDRAFT_34057
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Entry
TREMEDRAFT_34057 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
tms
Tremella mesenterica
Pathway
tms00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TREMEDRAFT_34057
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tms01007
]
TREMEDRAFT_34057
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_34057
Enzymes [BR:
tms01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
TREMEDRAFT_34057
Amino acid related enzymes [BR:
tms01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
TREMEDRAFT_34057
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TREMEDRAFT_34057
Prokaryotic type
TREMEDRAFT_34057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
Motif
Other DBs
NCBI-GeneID:
18492536
NCBI-ProteinID:
XP_007006963
JGI:
Treme1_34057
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MGADSKPVVPNNPPHPWPSPKDWPASKVRQTFIDYFAQQPGFEHTFWPSSGVIPFEDDTL
LFANAGMNQFKPLFLGTADPKSELSKLHRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFE
MLGNWSFGDYFKIGALTMAWDLLTRVYGLPKDRLYVTYFEGDEKQGLEPDNEAKEIWKQL
GVPETHILTGNAKDNFWVEMGATGPCGPCSEIHFDRIGGRDASHLVNADDPNVLEIWNNV
FIQYNRESSGALRSLPAKHVDTGMGFERLVSVLHNVSSNYDTDVFTPIFAKIQELTGARP
YTGKLGDEDKDGVDTAYRVIADHIRTLTIAISDGGVPDKDGRGYVLRRILRRGVRYASNK
MNVKIGSFFSSLVPTVVDSLSGIFPEVTKRIPELIEILNEEEASFARTLNRGETLFSKYA
AIAAQEKRTVLSGKDIWRLYDTYGFPVDLTQIMAEERGLKIDQVAFEKARLESLEASKAG
GKAAGGVQIKLDVHDLAALEENADVPKTDDSAKYQLDDIEATVKGIYYQSKFHQSTSELP
PNVPFGILLNKTNFYAESGGQENDTGVLAIDGKAEFKVEDVQVYNGYVLHVGQMEEGEIK
LGDEVICTYDELRRWPIRNNHTGTHILNFALREVLGDHIDQKGSLVAPSKLRFDFSHNKA
ISVDEIAKIEAISNEWIKKAVPVYAKEMSLQAAYKIPGLRAVFGEAYPDPVRVVSIGYPL
EEISQNIEDTKWRSTSIEFCGGTHVAKTDDIKDFVIIEESSIAKGIRRIVAVTGHDANDV
SRRGLEFERRLERIESMQGKEKETSMKPYLAELGQSGISLVKRHSLQRRFDKLSSDLAAI
TKTRLAAEQKQVSEEIKTFFLENPNENVYVGIFGVDGNIKVLSAAVTSTGRTLSKAIYAF
SSEIDTGKVTHVNYVPKEILDKKSLDAKVWLSEVSKVLGGKGGGRDDSATGVGVEGGKIE
EALKVAKEVYKSKVEGK
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgggagccgactccaaacccgttgtccccaacaacccccctcatccttggccctccccc
aaagattggcccgcttccaaagtccgtcaaacgttcattgattactttgctcaacaaccc
ggatttgaacacactttctggccttcttcaggtgtgatacctttcgaagatgatactctc
ctctttgcaaatgccggaatgaaccaattcaaacccttgttcttgggaactgctgatcct
aaaagcgaacttagtaaattacatcgtgccgtgaacagccagaagtgtattcgagcaggt
ggcaagcataatgatctagatgatgtgggcaaagatacttatcaccacacgttctttgaa
atgctaggaaattggtcattcggtgattatttcaagattggagctttgacgatggcttgg
gatcttttgactagagtttatggtctacctaaggatcgtttgtatgtcacatactttgaa
ggagacgagaaacaaggtttagaaccggataatgaagcaaaagaaatatggaagcaactt
ggagtaccggaaacccatattctcactgggaatgccaaagacaacttctgggtagaaatg
ggtgcgacagggccctgtggtccatgcagtgagatccatttcgatcgtatcggtggtcgt
gatgcctcccaccttgtcaacgccgatgatcctaacgttttggaaatatggaacaacgtg
ttcattcaatacaacagagaatcctccggagcgttacgaagtcttcccgccaaacatgtg
gacacgggcatgggtttcgaacgtttagtatcagtccttcacaacgtgtcatccaactac
gacaccgacgttttcacccccatcttcgccaaaatacaagagctcactggtgctagacca
tatactgggaaattaggagatgaagataaagatggagtagatacagcctatcgagtcatt
gcggatcatataagaacactcaccatcgccatttcagacggtggagttcctgataaagat
ggaagaggttatgttctccggcggatcttgagaagaggagtgagatatgctagtaataag
atgaacgtcaaaattggatcttttttctcttctttggttcccacggttgttgatagtctg
agtgggatttttccggaagtgactaaacgtattccagaactcatcgagattctcaatgaa
gaagaagcttcatttgcacgtacgttgaatcgaggtgaaacgttattcagcaaatacgcc
gcgatcgccgctcaggagaaacgtaccgttttgagtggtaaagatatttggagattgtat
gacacttatggattcccagtggacctcacacagataatggcggaagaaaggggtttgaag
attgatcaagtagcctttgagaaagcacgtttggaatctctagaagcaagtaaagctgga
ggtaaagcagcaggaggtgtacagattaagttggacgtgcatgatttggcagcgttggag
gaaaatgcagatgttcctaagacggacgattcggcgaagtatcaactggacgacatcgaa
gccacggttaaaggtatttattaccaatccaaattccaccaatcgacatcggaacttcct
cccaacgttccttttggtatcttactcaacaaaacgaatttctacgcagagtcaggtgga
caggagaatgataccggtgttcttgctattgatggtaaagccgaattcaaggtcgaggac
gtgcaagtgtacaacggatacgttctgcatgtggggcaaatggaagaaggggagattaaa
ttaggtgacgaggttatctgcacgtatgatgagcttcgacgatggcctatccgaaataat
cacactggcacacatatcctaaactttgccctccgtgaagttctcggagatcatatagac
caaaaaggttcccttgtcgcaccttccaaactccgctttgatttctctcacaacaaggcc
atctcggtagatgagattgctaagattgaagccatctccaacgagtggatcaagaaagct
gtaccggtgtacgctaaagagatgtcgttacaggctgcatacaagattccaggattgaga
gcggtatttggggaagcgtatcctgatccagtgagagtggtcagtatcggatatcctctg
gaggagatttctcaaaatattgaagataccaaatggcgtagtactagtatagagttttgt
ggaggaacacatgtggctaaaacagacgatatcaaagattttgtcattattgaagaatct
tcaatcgccaaagggatccgacgtattgtcgctgtgacaggacatgatgctaacgatgtt
tctcgtcgtggtttagagtttgaacgacggttagagcggattgaaagtatgcaaggtaag
gagaaagaaacatccatgaaaccttatttggcggaactaggtcaaagtggtatttccctc
gtcaaacgtcattcccttcaaagacgattcgacaaactctcttccgatctcgctgcaata
accaaaacccgtctagcggctgaacaaaaacaagtctcagaagaaatcaagactttcttc
cttgaaaaccctaacgaaaacgtttacgtaggtattttcggtgtagatggtaatatcaaa
gtactctccgctgctgtaacgtctactggaagaacattgtccaaagctatttacgctttc
tcttcggagatcgatacgggtaaagtcacacatgtgaattatgtacctaaagaaatattg
gataagaagagtttggatgctaaagtttggttgagtgaagtgagtaaggttttgggtgga
aaaggtggtggaagggatgattccgctactggcgtaggggtggagggagggaagattgaa
gaggctttgaaagttgccaaagaggtttataagagtaaggtggaaggtaagtga
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integrated database retrieval system
