KEGG   Tremella mesenterica: TREMEDRAFT_34323
Entry
TREMEDRAFT_34323  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K12842  U2-associated protein SR140
Organism
tms  Tremella mesenterica
Pathway
tms03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TREMEDRAFT_34323
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tms03041]
    TREMEDRAFT_34323
Spliceosome [BR:tms03041]
 Complex A
  U2 snRNP components
   U2 related factors
    TREMEDRAFT_34323
 Complex B
    TREMEDRAFT_34323
SSDB
Motif
Pfam: RRM_1 CID Surp RRM_7 CTK3
Other DBs
NCBI-GeneID: 18492571
NCBI-ProteinID: XP_007006998
JGI: Treme1_34323
LinkDB
Position
Unknown
AA seq 750 aa
MSRKLDLSRFRDDDSDDDNPFVPKTKLELTDLKSKVFALGNTKKSKKDLEREAEERRKKE
DEEAAKLVMAEYEEAFEKPSGSTTRNRFVPAGGFVKAATTPAPVIPKGPKSMENIPRGPA
AMGYGRPTRPSPPKQPSPPPGPKPRGKRAMDAFLEELKRNEAAREERLGRTAQLEGSSIA
ALAAWENEKGGKPPEEGESTNLFITNLPQNITEESLGMFFAKHGPIGTVKIMWPRGEEDR
RGTRGLMGFVNFMKRRDAELALEANDQLDWGGTIIRVTWSKSAPKPSKPIYGVFSLLSLR
KRSRSDSRGRTRRRSYSSSSYSSYSDSRSRSRSRSPPSKSDLYRDQWVAKIDKDRAEFVK
GVARKIRDRGSGYAEDLRMKEKGNKKYDFLSDNTLPEYHLYRSGLSSRYRFPTPPPDPFI
DDGIASVYSTDSAEESEKERTAKGHLGKLARKRFEALLRVMSGKRAEIARAMEFALVRAE
AADEVAEMVCESLKLGGTPVPRKMARLHLVSDILHNSASPLPNVWKYRLAFESRLSPVFA
HLCTVTQSLDAYSGRISAEVFRNQVLAVLDIWDRWMLFNQGVNDTLRNLLLGKTSLSSLT
SRDTISKSGSTMESSEPKKSEGEMKGFKSGGFKSSFKPIGSVVSVSITDTAVQMGEVEDV
DGKPMDGEDVDGEPMNEEDVDGEPMNEEDVDGEPMDEEDVDGEPLNEEDVDGEAMNGSNY
LRRYDLKEEEDVDGEPMEILDEEDVDGIPF
NT seq 2253 nt   +upstreamnt  +downstreamnt
atgtcccgtaaattagacctctcaaggttcagagatgacgattcggacgatgataatcct
ttcgtacccaagacaaagttggaattgacagatttgaaatcaaaggtttttgctttaggg
aataccaaaaagtctaagaaagatttagagagggaagcagaggaaaggaggaagaaagag
gatgaagaagccgctaaacttgtcatggcggaatatgaagaagctttcgagaaaccttca
ggatctacgactcggaatcgattcgttcctgctggaggattcgttaaagctgcaacaaca
cctgcgcctgttattcccaaaggtccgaaatctatggaaaacattcccagaggaccagca
gcgatgggttatggcaggccaacaagaccatctccgccaaaacaaccctcccctcctcca
ggcccaaagcctcgaggaaaacgagccatggacgcgtttttagaagaattgaaaagaaac
gaagctgctcgggaagaaagattaggccggactgcccaactagaaggctcatccatcgcc
gcgctcgcagcttgggagaatgagaaaggcggaaagcctcctgaagagggcgagtcgaca
aatctgttcatcaccaatctccctcaaaatatcacagaagaaagcctgggaatgttcttc
gccaaacacggcccgatagggaccgtcaagatcatgtggcccagaggtgaagaagatcgt
aggggtacgagaggcttgatgggatttgtcaactttatgaaacgtcgggatgctgaactg
gccctcgaagcgaacgatcagttggattggggtgggactatcatccgagtgacatggagt
aaatcagctccaaaacctagtaaaccgatctatggtgtgttttcgttgttgtctcttcgt
aaacgttcccgatctgactcacgtggtcggactcgtagacggtcttattcgtcttcctct
tactcttcgtattccgattccaggtcaagatcaagatcacggagtcctccttccaaatct
gatctttatcgagatcaatgggtagcgaagatagacaaagaccgcgcggagtttgtcaaa
ggtgtagcgaggaagatcagagatagaggaagtggatatgccgaagatttgagaatgaaa
gagaaggggaataaaaagtatgattttttgtctgataacacgctgccagaataccatctc
tatcgatcaggcctctcatcacgatatcgattccctacacctccccctgacccattcatc
gatgatggtatagcttccgtctactctaccgattccgcagaggaaagtgagaaagaacgt
actgccaaaggtcatcttggtaaactagctaggaaaaggttcgaagcattgttaagggtg
atgagtgggaaaagggcggaaattgctagagctatggaattcgctttggtccgtgcggaa
gctgcggatgaagtggctgagatggtttgtgaaagtttaaaattgggtggaacacctgtt
cctaggaaaatggcgaggttgcatttggtttctgatattttgcataattccgcttctcct
cttccgaatgtatggaaatacagattagctttcgaatcccgtctttcacccgtcttcgcg
cacttatgtaccgtcactcaaagtttggacgcttattcgggtcgaatcagtgcggaggta
tttagaaatcaagttttagccgtgttggatatctgggatcgttggatgttattcaaccaa
ggagttaatgatacccttcggaatttattactaggcaagacatctttatcatctctcacg
tctcgagatactatttcaaaatcaggatcaacaatggaatcttcggaaccgaaaaagtct
gaaggggagatgaagggattcaaatcaggaggattcaaatcgagctttaaacctattgga
agtgtcgtttctgtttctatcacggacacggctgtgcagatgggagaagtggaagatgtc
gacgggaaaccaatggacggcgaagatgtagatggtgagccaatgaacgaggaagatgta
gatggtgagccaatgaacgaggaagatgttgatggggaacctatggacgaggaagatgta
gatggtgagcctttgaacgaggaagatgtagatggtgaagcaatgaacggttcgaattat
ttgagacgatacgatctgaaagaagaggaagatgttgatggtgaacctatggaaattttg
gatgaagaagatgtagatggaatcccattttga

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