Tremella mesenterica: TREMEDRAFT_34561
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Entry
TREMEDRAFT_34561 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
tms
Tremella mesenterica
Pathway
tms03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TREMEDRAFT_34561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_34561
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
TREMEDRAFT_34561
INO80 complex (yeast)
TREMEDRAFT_34561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
Herpes_ORF11
VSG_B
Motif
Other DBs
NCBI-GeneID:
18492600
NCBI-ProteinID:
XP_007007264
JGI:
Treme1_34561
LinkDB
All DBs
Position
Unknown
AA seq
1428 aa
AA seq
DB search
MAAALEDELLDLAGDTSSRLDSDDERPSTPSLRLSHSAQPTPHSNREDVTPKARTSASNP
DDPFDQPEGQVTDKKKGKTKEETTENVADRWDPDIIVQPSGLTRAEVITKVESGNMRGLT
EEDVKAVQDEMWMRQKIKDGKALVRKDGTIRKKPGPAKGWKKLRRGEEFSEVEEGEESET
YHSTNMKVLNLSNNPQGSSPYDVYDQDEESNELENEHSNKIGMRKDKGKGKGKENQLDSL
DDQLESLVNPLNSNSKKTSKVKEPGVGKGRWTRPPKDDKKREIGYEEDLSSLGSSICSPE
FAALGFKPDRACPHVTPLTIPSMSKPFSTAQSGFVQTIFFVSCHTKQITDSQMYRVYQSS
STVLRANALRTAQACYRNSVTQRSLKPSFKTTSRQTKETISRSKKIMKELSLYWRKNEKD
ELAARKRAEKEALEKAKLEEEKRESKRQARKLNFLLTQTELYSHFVGKKIKTKEAEDVGD
DIGGDSVEKEKEKEKEKEGREELGLDDEGEPLPDIDYDDDDEENLRRHAARGAQAAVKAA
RDKAKAFDQSNNSAPIDLDGDELNFQNPTLSSDAQSISQPRMLMAQLKEYQLKGLTWLGN
LYEQGINGILADEMGLGKTIQSISLLAYLAETHNLWGPFLVIAPSSTLHNWQQELARFVP
RLKTLPYWGSPKDRETLRKVWCRKNLTFDEGSPFHVLVTSYQLAVQDEKYFQGTRWQYMI
LDEAQAIKSSSSARWKSLLSLHCRNRLLLTGTPIQNSMHELWALLHFIMPSLFDSHEEFS
EWFSKDIENAAGSGGATLKPEQLRRLHVILKPFMLRRIKKHVQKELGDKIEIDLLVDLSQ
RQRSIYRALRQRVSVSDLLAQANQSSDSSLAAKNLMNLVMQFRKVCNHPDLFERADVVSP
YMFGTFSQSGNLARQVEPLYCPDSARNAIDVKLPRLVWEEGKLDLPSDQSKAGDEGHVLR
NLMNIWREDWVEKRSKEDGDGWGFLKIAGLSPGQVARKVKGHPLVTVLTYAHQTEHPVKR
HGSRLTSSDQTFAASEKYPLRPLAPTIPTTRPPGLSPLADITSVAWNTSYLSRRAARFVL
EKAVVPPIRPYISSRAFLNTQRRLSTDPTLHDVLYGVPPSQLHSPTATSVLPIPPQGLIR
ASPLDQSPAASIKIPAFQRLIVDSAKLARLDELLRELKAGGHRVLLYFQMTRMMDLAEEY
LIYRQYKYLRLDGGSPIGERRDMVTSWQTNSDIFVFCLSTRAGGLGINLTAADTVIFYDH
DWNPSNDAQAMDRAHRVGQTKQVTVYRLIARGTIEERIIRLARGKKDVQDIVVGAKSLTD
VAKPAEIVSLFMDDDELAESVAKRKQAEAHGYVAPMNGTSKGKTSFGDALVTGGDEDEDD
FFSLGRKVVNGEDEEYGDEGQGKSGAGSGTVTPLQKGGKKRKAENEGE
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcattggaagacgaactactcgatctagctggtgatacgagttctcgactt
gattcagacgatgaacgtccttctacaccatccttacgtctttctcattctgctcaacca
acacctcattccaatcgagaagatgtcactcccaaagctcgtacttcagcttccaaccct
gacgacccattcgatcaacccgaaggtcaagtgacggataaaaagaagggtaaaacgaaa
gaagaaacgacggaaaatgtggcggatcgttgggatccagatataatcgtacaaccttcc
ggtttgacacgtgcagaagtcattaccaaagttgaaagtggtaacatgagaggattgaca
gaagaagatgttaaagcagttcaagatgaaatgtggatgagacaaaagattaaagatggt
aaagctttagtcaggaaagatggtactattcgaaagaaaccaggtccagcgaaaggttgg
aaaaaattaagaagaggtgaagaatttagtgaagttgaagaaggtgaagaatctgaaact
tatcattctacgaatatgaaagttttaaacctttctaataatcctcaaggttcaagtcca
tacgatgtttatgatcaagatgaagaaagtaacgagttagaaaatgaacattctaataaa
atcggaatgagaaaagataaagggaaaggtaaagggaaagagaatcaattagattcttta
gatgatcaattagaatcattagtaaatcctttaaattcaaattccaagaaaacttctaaa
gtgaaagaacctggagtggggaaaggtagatggacaagacctcctaaagatgataaaaag
agagaaatagggtatgaagaagatctttcatctttgggctcgagtatctgctcgcctgaa
tttgctgcactaggtttcaagccggatcgggcgtgtccacacgtaactcctctcaccatt
ccgtctatgtcaaagcccttttcaactgcccagtctgggtttgttcaaacgatatttttt
gtctcgtgtcatactaaacaaataactgattcccagatgtacagagtctaccaatcatca
tccacagtcctccgagccaacgcactccgtacagctcaagcatgttatcgtaattccgta
actcaaagatctttgaaaccatctttcaaaacgacctcccgtcaaacgaaagaaactata
tcacgttcaaagaagataatgaaagaattatctctgtattggcgtaaaaatgaaaaagat
gaattagcagctaggaaaagagctgaaaaagaagctttggaaaaagcgaaattggaagaa
gaaaaaagggaaagtaaacgtcaagctaggaaattgaatttcttgttgactcaaacggaa
ctgtattctcatttcgtcgggaagaaaataaaaacgaaagaggctgaagatgttggggat
gatattggaggtgattcggtggaaaaggagaaggagaaggagaaggagaaggagggaaga
gaagaattaggtttggatgatgaaggggaaccattacctgatattgattatgatgatgat
gacgaagaaaaccttcgacgacacgctgctagaggtgctcaggctgctgttaaagctgct
agggataaagccaaagcttttgatcagtcgaacaatagtgcacctatagatctcgacggc
gacgaactaaacttccaaaaccccactctctcttccgacgctcaatccatttctcaacca
cgtatgctcatggcccaattgaaagaatatcaactaaaaggtctcacatggctaggtaat
ctatacgaacaagggatcaacggtattctagcagacgaaatgggtctaggcaaaaccatc
caatctatttctctcctagcttatctagctgaaacacataatctctggggtccattcttg
gtgattgcaccaagttcgacattacataattggcaacaagaattagctaggtttgttcct
cgattgaaaacattaccttattggggtagtccgaaagatagagaaactttaagaaaagta
tggtgtaggaagaatttgacttttgatgaaggtagtccttttcatgttttggttacttcg
tatcaactcgccgtccaagatgagaaatactttcaaggcacaagatggcaatacatgatt
ttagacgaagcacaagccatcaaatcgtcaagttctgctagatggaaaagcttgttgtcg
cttcattgtaggaacaggttgttattgaccggtacaccgatacagaattccatgcacgaa
ctatgggctctacttcatttcatcatgccttctttgtttgactcgcacgaagagtttagc
gagtggttctccaaagatatagagaatgcagctgggagtggtggagctacgttgaagcct
gaacagctcagacggttgcatgtgattttgaaacctttcatgttgagacggataaagaag
catgtgcagaaagaattgggtgataagatcgaaatcgacctcctagtcgacttgtcacaa
cgtcaacgttccatctaccgtgctctccgacaacgagtctccgtatccgatctcttggct
caagccaaccaatcatccgactcctccctcgccgcaaagaacctcatgaacctcgtcatg
cagtttcgtaaagtctgtaaccatccggatctctttgaacgtgcagacgtagtatcgccg
tacatgttcggtacattctctcaatccggtaatctcgcaaggcaagtcgaacctctttat
tgtccagacagcgcacggaatgccattgatgtaaaattacctaggttagtatgggaagaa
ggaaagttggatttaccttctgatcagagtaaagcgggggacgaaggacatgtgttgagg
aatcttatgaatatctggagagaagattgggtggagaaacgttcgaaggaagatggggat
ggatggggatttttgaagattgctggattgtcacctggtcaagtagcgaggaaagttaaa
ggacatcctttggtcactgtgctgacatatgctcatcagactgagcacccggtgaaacga
catggcagcaggctgacttccagtgatcaaacctttgccgcgtcagagaaataccctctc
cgacctctcgcaccgaccataccgaccactcgtccacccggactctcacctttagcagac
atcacctcagtcgcatggaacacatcttacctttctcgccgcgcagcacgtttcgtactt
gaaaaagctgtcgttcctcctatccgaccttacatctcatcacgtgcattcctcaacact
caacgtcgtctcagtaccgatccgacattacatgacgttctctacggagtgcctccttcc
cagctccactctcctacagctacctctgtcctcccaatcccaccacaaggtcttatccgt
gccagtcctcttgaccagagtccagcagctagcatcaagatcccggctttccaaagatta
atcgtcgattctgccaaactggcaagattagacgaacttctacgagaattgaaagctggt
ggtcatagagttttgttgtatttccaaatgaccagaatgatggatctggcagaggagtat
ctgatttatagacaatacaagtatttgaggttggatggaggaagtccgattggtgagaga
agggatatggtcactagttggcagacgaattctgatatcttcgtgttttgtttatctaca
cgtgctggtggattgggtatcaatttgaccgctgcggatactgttatattttacgaccac
gactggaatccctccaacgacgcccaagcgatggatcgtgcccaccgagtaggtcaaacg
aaacaagtcactgtctaccgtctcatagcccgaggtacgatcgaagaacgtatcatccgt
ctagctcgaggtaaaaaagatgttcaagacattgtcgtcggagctaaatctcttaccgac
gtggctaaaccagcggaaatcgtatccttgttcatggacgatgacgaattggcagaatca
gttgctaaacgtaaacaagccgaagcgcacggatacgtagcacccatgaacggtacatca
aagggaaagacttcattcggggatgcattggtgacgggtggtgatgaagatgaagatgat
ttcttctcgttaggacggaaagtcgtcaatggagaagatgaagagtatggggatgaagga
caggggaagagtggagcggggagtgggactgttacgcctttgcaaaaaggtggaaagaag
aggaaggcggagaatgagggtgagtag
DBGET
integrated database retrieval system