KEGG   Tremella mesenterica: TREMEDRAFT_34892
Entry
TREMEDRAFT_34892  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K17919  sorting nexin-4
Organism
tms  Tremella mesenterica
Pathway
tms04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:tms00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    TREMEDRAFT_34892
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tms04131]
    TREMEDRAFT_34892
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:tms04990]
    TREMEDRAFT_34892
Membrane trafficking [BR:tms04131]
 SNARE
  SNARE associated proteins
   Others
    TREMEDRAFT_34892
 Protein recycling
  Rab GTPases and associated proteins
   Rab4 associated proteins
    TREMEDRAFT_34892
 Autophagy
  Cytoplasm to vacuolar targeting (CVT) pathway
   Other Cvt associated proteins
    TREMEDRAFT_34892
Domain-containing proteins not elsewhere classified [BR:tms04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   TREMEDRAFT_34892
SSDB
Motif
Pfam: PX Vps5 CC4_CEP85 Surfac_D-trimer PCRF
Other DBs
NCBI-GeneID: 18492637
NCBI-ProteinID: XP_007007496
JGI: Treme1_34892
LinkDB
Position
Unknown
AA seq 484 aa
MDDEDGFQSIAWDDAPPKLPHLDVSSPIDDDHGFETISPVPQSPGSPSTSTANNDTPRAP
RRTLPAKLEEVDPAEWGGRWMSVEVYSPMKEHDGTKDMFVSYAVRTKTNLPTFRTSESVT
RRRFQDFVFLHDHLAKNFPASVVPPIPDKHRLEYIKGDRFGAEFVERRRQDLQRFADRIA
RHPTLQRSKLVYDFLTSSEWSVAKHHHLAHPPPDSHTSLLDSLSDTFINAFSRVRKPDAR
FVEMAEQLERFEEGLGGVERLMGRSKNRVDDLAADYQDMAAAYQGLGYLESGITEPLNRF
AEKMLDFSALLKHMNATTLEPFLLQSHSLLTHAAAHRGIIKLRDQKQLDFEELSAYLSAI
VSERDRLAALSSGHAGAPVGLTTYLRDQVDRLRGTDDIHTRRERMRKLDGRIKELQDAVT
NAHETSTAFSDEVLKEHNVFELSKKEEMKEMLQTYADGQIEMFQKAMDDWDKIIPILQKI
RVDI
NT seq 1455 nt   +upstreamnt  +downstreamnt
atggacgacgaagacgggttccaatctatcgcatgggacgatgctccccctaaactccca
cacctcgacgtgtcatcgcctatcgatgatgatcacggtttcgaaaccatcagtcctgta
cctcaatctcccggtagtccttcgacttccacagcgaacaatgataccccacgagcaccc
cgtcggactctaccagcaaagcttgaagaggttgatccggccgaatggggtggtagatgg
atgagtgtagaggtgtacagtccgatgaaagaacatgatgggacaaaggacatgttcgtt
tcttatgccgttcgaacaaagaccaatctacctacgtttcgcacttcagaatctgtaaca
agaagacgatttcaagattttgtattcctgcatgatcatctagcaaaaaactttccggcc
tcggtggtacctcccatccccgacaaacaccgtttagagtacatcaaaggtgatcgtttc
ggtgcggaatttgttgagcgtcgtcgacaagaccttcaacgtttcgcagatcgtatagct
cgtcatcccacattacaacgtagtaaattagtctacgacttcctaacctcttcagaatgg
tccgtagcgaaacatcatcatcttgctcatcctccacctgattcccacacttcactcctc
gactctttgagcgatacatttatcaatgcattttcacgtgttcgtaaacccgatgctcga
tttgtggaaatggccgaacagctcgaacgattcgaagaaggtttaggtggtgtggaacgt
ttgatgggaaggagtaagaatagggtggatgacttagcggcggattatcaagatatggct
gctgcgtatcaaggtttgggatatttagaatcgggtataacggaaccgttgaataggttt
gcagagaagatgttagatttctcagctttactcaaacatatgaacgcaacaaccttagaa
cctttcctcttacaatctcactctcttctcacccacgcagcagctcatagaggtatcatc
aaactccgagatcaaaaacaattagatttcgaagaactttcagcctacttatctgccata
gtatcggaacgtgatcgacttgctgctctttcctctggacatgcgggtgcaccagtggga
ttaacaacatatcttcgagatcaggttgatcgtctgagagggacagatgatatacatacg
agaagagagagaatgaggaagttggacggaaggataaaagagttgcaagacgcggtcaca
aacgctcacgaaacaagtacggccttttctgacgaagtgttaaaagaacataatgttttt
gaattatcaaagaaagaagagatgaaagagatgcttcaaacttatgctgatggtcaaatt
gagatgtttcaaaaggcaatggacgattgggacaaaatcattcccattctacaaaagatt
cgtgtggacatataa

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