Tremella mesenterica: TREMEDRAFT_34892
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Entry
TREMEDRAFT_34892 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K17919
sorting nexin-4
Organism
tms
Tremella mesenterica
Pathway
tms04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
TREMEDRAFT_34892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_34892
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tms04990
]
TREMEDRAFT_34892
Membrane trafficking [BR:
tms04131
]
SNARE
SNARE associated proteins
Others
TREMEDRAFT_34892
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
TREMEDRAFT_34892
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
TREMEDRAFT_34892
Domain-containing proteins not elsewhere classified [BR:
tms04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
TREMEDRAFT_34892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
Vps5
CC4_CEP85
Surfac_D-trimer
PCRF
Motif
Other DBs
NCBI-GeneID:
18492637
NCBI-ProteinID:
XP_007007496
JGI:
Treme1_34892
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MDDEDGFQSIAWDDAPPKLPHLDVSSPIDDDHGFETISPVPQSPGSPSTSTANNDTPRAP
RRTLPAKLEEVDPAEWGGRWMSVEVYSPMKEHDGTKDMFVSYAVRTKTNLPTFRTSESVT
RRRFQDFVFLHDHLAKNFPASVVPPIPDKHRLEYIKGDRFGAEFVERRRQDLQRFADRIA
RHPTLQRSKLVYDFLTSSEWSVAKHHHLAHPPPDSHTSLLDSLSDTFINAFSRVRKPDAR
FVEMAEQLERFEEGLGGVERLMGRSKNRVDDLAADYQDMAAAYQGLGYLESGITEPLNRF
AEKMLDFSALLKHMNATTLEPFLLQSHSLLTHAAAHRGIIKLRDQKQLDFEELSAYLSAI
VSERDRLAALSSGHAGAPVGLTTYLRDQVDRLRGTDDIHTRRERMRKLDGRIKELQDAVT
NAHETSTAFSDEVLKEHNVFELSKKEEMKEMLQTYADGQIEMFQKAMDDWDKIIPILQKI
RVDI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaagacgggttccaatctatcgcatgggacgatgctccccctaaactccca
cacctcgacgtgtcatcgcctatcgatgatgatcacggtttcgaaaccatcagtcctgta
cctcaatctcccggtagtccttcgacttccacagcgaacaatgataccccacgagcaccc
cgtcggactctaccagcaaagcttgaagaggttgatccggccgaatggggtggtagatgg
atgagtgtagaggtgtacagtccgatgaaagaacatgatgggacaaaggacatgttcgtt
tcttatgccgttcgaacaaagaccaatctacctacgtttcgcacttcagaatctgtaaca
agaagacgatttcaagattttgtattcctgcatgatcatctagcaaaaaactttccggcc
tcggtggtacctcccatccccgacaaacaccgtttagagtacatcaaaggtgatcgtttc
ggtgcggaatttgttgagcgtcgtcgacaagaccttcaacgtttcgcagatcgtatagct
cgtcatcccacattacaacgtagtaaattagtctacgacttcctaacctcttcagaatgg
tccgtagcgaaacatcatcatcttgctcatcctccacctgattcccacacttcactcctc
gactctttgagcgatacatttatcaatgcattttcacgtgttcgtaaacccgatgctcga
tttgtggaaatggccgaacagctcgaacgattcgaagaaggtttaggtggtgtggaacgt
ttgatgggaaggagtaagaatagggtggatgacttagcggcggattatcaagatatggct
gctgcgtatcaaggtttgggatatttagaatcgggtataacggaaccgttgaataggttt
gcagagaagatgttagatttctcagctttactcaaacatatgaacgcaacaaccttagaa
cctttcctcttacaatctcactctcttctcacccacgcagcagctcatagaggtatcatc
aaactccgagatcaaaaacaattagatttcgaagaactttcagcctacttatctgccata
gtatcggaacgtgatcgacttgctgctctttcctctggacatgcgggtgcaccagtggga
ttaacaacatatcttcgagatcaggttgatcgtctgagagggacagatgatatacatacg
agaagagagagaatgaggaagttggacggaaggataaaagagttgcaagacgcggtcaca
aacgctcacgaaacaagtacggccttttctgacgaagtgttaaaagaacataatgttttt
gaattatcaaagaaagaagagatgaaagagatgcttcaaacttatgctgatggtcaaatt
gagatgtttcaaaaggcaatggacgattgggacaaaatcattcccattctacaaaagatt
cgtgtggacatataa
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integrated database retrieval system