KEGG   Tremella mesenterica: TREMEDRAFT_34983
Entry
TREMEDRAFT_34983  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K12868  pre-mRNA-splicing factor SYF2
Organism
tms  Tremella mesenterica
Pathway
tms03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TREMEDRAFT_34983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tms03041]
    TREMEDRAFT_34983
Spliceosome [BR:tms03041]
 Complex B
  Other components
   Prp19-related factors
    TREMEDRAFT_34983
 Complex C
    TREMEDRAFT_34983
SSDB
Motif
Pfam: SYF2 DUF413 DUF2563
Other DBs
NCBI-GeneID: 18492646
NCBI-ProteinID: XP_007007505
JGI: Treme1_34983
LinkDB
Position
Unknown
AA seq 195 aa
STVANRKDLIADHQKAKVTAKELARLEKQRKLAQTLRLKADAEETGEDLERKKAWEWSIE
QNERWEAKMADQAVRADGRFHNAEDEAHKQYNRNVRVTKPDLVAYERAKEAALGLAPGMD
TLAYGDSKPSEDAVDRVVGKINKDLDKGKRKKKEEEDETVTYINQRNKVFNKKVARYFDK
YTKEIRASFERGTAL
NT seq 588 nt   +upstreamnt  +downstreamnt
tccaccgttgccaatcgtaaagatctcattgccgaccatcaaaaggccaaagtgacggcg
aaagaactagcaaggttggagaaacaacgcaagcttgctcaaactttacgactgaaggcg
gatgccgaggaaacgggtgaagatctggagaggaagaaagcttgggagtggagtattgag
cagaatgagagatgggaagctaagatggctgatcaggctgtgagagcggatgggagattt
cacaatgcggaggatgaagcacacaaacagtataatcgtaatgtacgcgtcactaaacca
gatctggtggcatatgaacgggccaaggaagcggcgttgggattagcacctggaatggac
acgttggcctatggagacagtaagcctagtgaggatgcagtggaccgggtggttggaaag
ataaataaagatctggacaagggtaagagaaagaagaaggaagaggaagacgagaccgtt
acgtatatcaaccagcgcaacaaagtcttcaacaaaaaggttgcgcggtatttcgacaaa
tacacgaaagagatccgagcgagcttcgaacggggtaccgctctttag

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