Tremella mesenterica: TREMEDRAFT_35229
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Entry
TREMEDRAFT_35229 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
tms
Tremella mesenterica
Pathway
tms03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TREMEDRAFT_35229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tms03041
]
TREMEDRAFT_35229
Spliceosome [BR:
tms03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
TREMEDRAFT_35229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Alveol-reg_P311
Motif
Other DBs
NCBI-GeneID:
18492675
NCBI-ProteinID:
XP_007007711
JGI:
Treme1_35229
UniProt:
R7SBE8
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MNDGDGDDMRMENGQSAVGYVPEGGARPAEELDQEEVEKTDMAGVEDVGKIAKLMTGNKL
KEILSEIEKYTANPTDMSSTTSIPLSENPEYVLVVKANNMSVEVDNEILLVHKFIRDHYA
PRFPELEQLIADPWTYIAAVKAIANAEDLTKCILPSTLPPATILSITLTATSTRGRLLTP
GEWKMVQRAVDVASDLRIARETIFAYVESRMAAVAPNLSAIVGTGIAAKLLGLAGGLQAF
SRTPSCNVMLFGALKKTLATTHMSAASQQRHTGFIFQSQLVQTAQPEDRRRAQRAVAAKC
VLAARIDAGKGARDGSYGRKCLLDLQKRIEKMAEPPPNKLTKALPIPKETNRKKRGGKRA
RKQKEAYAQTELRKLQNRMEFGKPEEETGVDDETIGLGMIGSASGRVRAEVVDSRSKAKL
SRANKLRTQVLGRSALSSDSKSGTATSLSFTPVQGLEIVTPSLTAASKVKEANDRWFAGG
TFTHVKKGGSSIPGQDSMK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatggagatggggatgatatgagaatggagaatggtcaaagtgcagtgggttac
gtaccggagggaggggcacgaccagcggaagagttggatcaggaagaagtggaaaagact
gatatggccggagtggaggatgtgggcaagatcgcaaagttgatgactggtaataaactc
aaggaaatattatccgaaattgaaaaatacactgccaaccctaccgacatgtcctccacc
acctccattcccctttccgaaaaccccgaatacgtactagtcgttaaagccaacaacatg
tcagtcgaagtggacaacgaaatcttactcgtacataagttcattcgtgatcattacgcg
cctcgtttccctgaactcgaacaactcatagccgatccatggacatacatcgcagctgtc
aaagctatcgccaatgctgaagatttgacaaaatgtatacttccttcaacattaccacca
gcgactatcctctctatcaccctcactgctacttccacaagaggacgattactcactcct
ggggaatggaagatggttcaacgtgcagtagacgtagcttcggatttacgtatagccaga
gagacgattttcgcttacgtcgaatcacgtatggcggctgtagcaccaaacttatccgcc
atagtggggaccggaatcgctgcgaaacttctagggctagcaggtggtttacaagctttc
agtaggacaccaagttgtaacgtcatgctatttggagcgttgaagaaaactttggctact
acacatatgtcagcggcttcacaacaaagacatacgggatttatctttcaatctcagttg
gttcaaactgctcagccggaggataggagaagagcacaaagagccgtagcggctaaatgt
gttttagcagctaggatagatgctgggaaaggagctagagatgggagttatggaaggaaa
tgtttattagatttacaaaagaggattgaaaagatggcggaaccacctcctaacaaattg
acaaaggcattaccgataccgaaggagacgaataggaaaaagagaggtggtaaacgcgct
cgtaaacaaaaagaagcatacgcccaaactgaacttcgtaaacttcaaaatcgtatggaa
ttcggtaaacctgaagaagaaacaggtgtagatgatgaaactatcggattgggtatgatc
ggttctgcttctggtcgtgtccgtgcggaagtggtcgattcacgttcgaaagctaaatta
tcacgcgcaaacaaacttcgtacacaagttctgggtcgaagtgctctatcgagcgattcg
aaaagtgggacagcgacaagtctcagtttcacaccggttcaagggttggaaatcgttact
ccgagtttgacagctgctagtaaggtgaaagaagcaaatgataggtggtttgcaggagga
acgtttacacatgttaagaaagggggaagtagtattccgggacaggattcgatgaagtga
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