Tremella mesenterica: TREMEDRAFT_35494
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Entry
TREMEDRAFT_35494 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K17677
ATP-dependent helicase IRC3 [EC:5.6.2.-]
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tms03029
]
TREMEDRAFT_35494
Mitochondrial biogenesis [BR:
tms03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
TREMEDRAFT_35494
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Irc3_C
DEAD
Helicase_C
AAA_30
AAA_22
DUF7593
SLFN-g3_helicase
AAA_19
Motif
Other DBs
NCBI-GeneID:
18492701
NCBI-ProteinID:
XP_007007995
JGI:
Treme1_35494
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MAAKRISFFTRLTAVTRLSILPPVYRFGPYHHVSIRPFSALPSPLHDPDVTPPVLSPLPP
EEPRPQTTVLRPYQHTAVEACLSALTSGLTRIGVSSPTGSGKTTMFMSLIPKISPQTSVG
VDGRGRTMIIVGSVELANQAESAAKRLLGEEWTVEVEQSKRVASGMANVTIATYQTLNSI
ERLKKFDPKKFKLIIVDEAHHAAAISYLRILHYFNEDVQLPSTISPITSQSHGSKVPIIG
FSATFSRHDQLALRAVFENIVFHTEISSMLQDGWLSPVKSTTIQCDLHLDTVKLTSTGDY
RTDSLALHINTPEISRLIVGTYLRRAKERRSTLIFCVDLSHVDNLTQAFRNAGVDARSVS
SATQASRRKETVAAFGRGEFSVLVNCEVLTEGADIPQIDCIILARPTKSKNLLAQMVGRG
LRLSPDTGKEDCHIIDIVDSMSRTNGMIVSPTLWGLSHDDITRDDSRSPSQDEPDLIAPG
DEEEERAQLQPRKITFIDNEDPFGLTSRSYIPVKRMSTNAWVYCGKDKYALELMGNHGWI
SIERQEDEDTWCITYRRKLSRYSKSRIPFARPIIVAYADDLERAMKSADAFAEKKLGREL
SSHLSRYAPWRQRPATEKQMKMLLSMARASSSSSETEIEEQSGDDRKARIDSLPGEVWLW
NRRISVDRLTAGEIAAYLCAAQHGGIAGRKKADKEEAALEKKAMKRREAEARNLPLPGKG
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaagcgtatatcattcttcaccaggttaacagctgtcactcgcctgagcata
ctccctcccgtctaccgattcgggccataccatcatgtttccatccggccattctcagcc
ctcccttcaccccttcatgatcccgacgtcaccccacctgtcctctctcctctgccaccc
gaggagccacgacctcaaacaacagtgctgcgaccataccaacacacagcggtagaagca
tgtctatcagcccttacctccggtttgacccgtattggcgtttcctcccccacaggaagc
ggcaagaccaccatgttcatgagtcttatccccaagatatctcctcaaacttctgtaggg
gtcgatggaagaggaaggactatgattattgttggaagtgttgaactggctaatcaagct
gaatctgctgctaagagactgttgggggaagaatggacagtggaagtggaacagtctaaa
cgggtagctagcggtatggcaaatgtgacaatagcgacttatcagactctcaacagtatt
gagaggttgaaaaagtttgatccgaaaaagttcaaattgattatcgtggacgaagctcat
catgccgctgctatctcgtatctacgcatattgcattacttcaacgaggatgttcaattg
ccatccaccatatcacctatcacatcacaatcacacggctccaaagttccaatcatcggg
ttttcagctactttctctcgacatgatcaacttgcccttcgtgcagtattcgaaaatatc
gtctttcatacggaaatatcttccatgttgcaagacggatggctctccccagtaaaatcc
accacgatccaatgtgatcttcacctggatactgtcaaacttacttctacaggagattat
cgtaccgattccttagcacttcatatcaacactccagagatcagtcgcttaattgttggt
acttatcttcgtcgagcaaaagaaagacgaagtactctgatattctgtgtggatttgagt
catgtggataatttgacacaagcttttagaaacgctggggtggatgcgaggtcggtttca
agtgccacacaagctagtagaaggaaagaaaccgttgctgcctttgggagaggagaattt
tcggtgttggtcaattgcgaagttttgacagaaggagctgatatacctcaaatcgattgt
attatccttgcaagacctacaaaaagtaaaaacctcctggctcaaatggtcggtcgaggt
ttacgtctctctccagacacagggaaagaagattgtcatatcatcgacatagtcgatagc
atgtctcggaccaatggtatgatcgttagtcccactctgtggggtttatcacatgatgat
ataactcgcgacgattcacgcagtccttctcaggatgaacccgacttaattgccccagga
gatgaagaagaagaacgagcacaacttcaaccacgaaaaatcacttttatagataatgaa
gatcccttcggtttaacatcacgatcatatattccagtcaaacggatgtcaacaaacgct
tgggtatattgtgggaaagacaaatacgctctggaactcatgggaaatcacggttggatc
tctatcgaacggcaagaggatgaagacacctggtgtatcacctatcgaaggaaattatct
agatactcaaaatcgagaatcccattcgccagaccgataatcgtagcatatgcggatgat
ctggagagagcgatgaaatctgccgatgcgttcgcagagaaaaagttaggtagagaatta
tcatcacatctatcgcgatatgctccatggcggcaaagaccagcgacggagaaacagatg
aagatgttgctttcaatggctagggcctctagctccagctctgaaacagaaatcgaggag
cagtccggagacgatcggaaggcgagaattgatagcttgcctggggaggtatggttatgg
aataggaggatctcagtggatcgattgacagctggggagattgcagcatacctatgcgcg
gcacaacatggaggtatagccggtaggaagaaagcggacaaagaagaggcggctttggag
aagaaggcgatgaagaggagagaggcagaagcgaggaatctgccattgcccggaaaaggg
gtgtga
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