Tremella mesenterica: TREMEDRAFT_35498
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Entry
TREMEDRAFT_35498 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tms03021
]
TREMEDRAFT_35498
Transcription machinery [BR:
tms03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
TREMEDRAFT_35498
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
18492703
NCBI-ProteinID:
XP_007007997
JGI:
Treme1_35498
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
CPLCRSTGPFETNLSAGTTICGSCYTIVEQGILVSEIGFGESAGGRVHVQGQFVSRFATG
IAGIRGASSASSEKAKQDGQAKVKSVGDAMNIEPHIIRGAQRWYGLAVDNRFNRGRRIEY
IVASCLYLQCRMKKDPHMLIDFSERLTINVYELGGTYLKLRSILSLTETMPEVDPAIYNL
RFANRLSFGAPAVVHAIAADASKLIRRFAADWMTQGRRPAGLCGACLIIAARMHDFLRTP
DEVAQVVKVAPITIHRRLREFAQTSIAKKTVEEWRNMTEEDLLHDTEDVPPVVKKQREQA
RKLAEKVKRETAMMGQEESSPPLEELDPQDDDDMTDPQGEGSTRRRGKERMTEEELDMGE
VIREVAENYGLDVFEGEEIEDPNLEEMGPTEYTKEVDAARDDPDQAKSERKRDQHAFRRS
IPSSFSTTAVDSDPTQSTLVEYDALGLEDKEEDLQEYDEDEKEDDDEKEEGQENGKRNNK
KKNFDEWEDEEATMIFLEKTYFSEEARLLAVTGTDIRERIKSWLRGREPKDVVMEMRTIE
NAYRKRAKGAKVKEDVFEDIDDEELDKYWIMDDHERDTRARMWLSSNGKWLEEEKTRQEK
KALEEKRKGESGRPKPKTKRKRPTARQKPFTTAREAITTLAIDKKFSSRVNYDALESAVE
KVDSELVMFDDKEDEGEKYDDDDDDGKYDDGEKDDGDDEEEEEWGGKRRRNGVVAFNVTD
YGGQARERRER
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
tgtcctctctgtcgctccacaggtcccttcgagacaaacctcagcgcagggacaacaata
tgcggaagttgctataccatcgtagaacagggtatcctcgtctctgaaattgggtttggt
gaaagtgccggtgggagggtacatgtgcaaggacagttcgtttctcgttttgcaaccggt
atagctggtatcagaggtgcttcttctgcctcttcggagaaggccaaacaggatggccaa
gccaaagtcaaaagcgtaggcgacgctatgaacatcgaaccccatatcattcggggagca
caaagatggtatggtctagctgttgataatcggttcaatcgaggtcggaggatagaatac
atcgtggctagctgcctgtatcttcaatgcaggatgaagaaggatcctcatatgttgatt
gatttttccgagcgtctgactataaacgtctatgaactcggtggtacttacctcaaactc
cgctccatcctatccctgaccgagaccatgcctgaagtcgatccagccatttacaatctt
cgcttcgccaaccgactttccttcggagctcccgcggtcgttcatgccatcgctgcggac
gcttccaagctcatccgacgttttgcggccgattggatgacacaaggacgtcgacctgct
ggtttatgtggtgcatgtcttatcatcgccgcgcggatgcacgattttctccggactccg
gacgaagttgctcaggtggtcaaagtggcacccataacgatccaccgaaggttgcgagag
ttcgctcagaccagcattgccaagaagacagtggaggaatggcgaaatatgaccgaagag
gatttgttacatgatacggaggatgtacctcctgtggtcaaaaagcaacgggagcaagct
cgaaaattggcagagaaagtgaagcgagaaacagctatgatgggacaagaagaatcttct
cctccacttgaagagctggacccccaggatgacgatgatatgacggatccacagggagag
ggcagtacgagacgaagaggtaaagaaaggatgacggaagaagaattagatatgggagaa
gtaattcgcgaagtagcagagaattacggtttggacgttttcgaaggtgaagaaattgaa
gatcctaatcttgaagagatgggacctacagaatacacaaaagaagtggatgccgcaaga
gacgatcccgatcaagctaaatctgaaagaaagagagaccaacacgcttttcgtcgatct
atcccttcttcattctccaccacagcagttgattccgatccgacacaatcgacattggta
gaatacgatgctttgggtttggaagataaagaagaagatttacaagaatatgatgaagat
gaaaaagaagatgatgatgagaaagaagaaggtcaagagaatggtaaaagaaataataaa
aagaaaaatttcgatgaatgggaagatgaagaagccaccatgattttccttgaaaaaaca
tatttctcagaagaagctagactcttagctgtcactggaacggatatcagagaaaggata
aaaagttggttgagaggtagagaacctaaggatgtagtaatggaaatgagaaccattgag
aatgcttataggaaaagagcaaagggagctaaagttaaagaagatgtatttgaggatatc
gatgatgaggaattggataagtattggattatggatgatcatgagagggatacaagggca
aggatgtggttgagtagtaatggaaaatggttggaggaggagaaaactcgacaagagaaa
aaagcgttagaagagaaacgtaaaggtgaatctggacgtcccaagccgaagaccaaacgt
aaacgtccaacagcaagacaaaaaccattcacaacagccagagaagccatcacaacttta
gctatcgataagaaattttcttctagggtcaattatgacgcactggaatcagctgtagaa
aaagttgatagtgaattagtgatgtttgatgataaagaagatgaaggtgagaaatatgat
gacgatgatgatgatggtaagtatgacgatggtgagaaagatgatggtgatgatgaggag
gaggaggagtggggaggaaaaaggagaaggaatggagtggtggcttttaatgttactgat
tatggaggtcaagctagggaaagaagggaacgataa
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