Tremella mesenterica: TREMEDRAFT_36926
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Entry
TREMEDRAFT_36926 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tms
Tremella mesenterica
Pathway
tms03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TREMEDRAFT_36926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_36926
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TREMEDRAFT_36926
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TREMEDRAFT_36926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
18492831
NCBI-ProteinID:
XP_007000858
JGI:
Treme1_36926
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MFYATAGQQTTPLPQPASRNASAPTPQQSGFPSETLMSPDLNDFPALGSQPTQSSSSSYM
TQTQPSQPNTSTQHPHLQQQMFLPQQANLVPPPGISGPIGQTQMNGAIGQASRGEDFPAL
GGATGALGPVGSGGEVKDRVCFRPMNVTPSSPSHSMVNGGNGHAESIAPSNPPPRAANLP
VSASEPLWPRKPSRPQEPIVRPVQQVFQSPVDNWDLKSMLMNIRAYSGHGDKGDLMFGVD
LGDLGINVESTEPLYPNFVTPWTDPRDRTEPFRVEESWHTPACYHVTAKPIETKLGEVAD
ETLFYIFYSQPQDVVQLQVAFELYHNRGWRYHMELRLWFTSEQLAAVDLRSLDKSHSNPI
QGPFTLHDPNTLRTTSTDESWVIDANLLEITRPAAVAIEESLKREAARSPNGSVTSGSGS
LMSSVMGAGYGQMQVTR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgttctacgcgacggcaggacaacaaactaccccactaccacaaccagcaagcaggaat
gcttctgctcctaccccacaacaatcgggtttcccgtcagagacactgatgagtccagac
ctgaatgatttccctgctctaggatcacaacctacacaatcatcttcctcaagttacatg
acccaaacgcaaccctcccaacctaacacgtccacccaacatcctcacctacaacaacaa
atgttcctcccccaacaagccaacttggtacctccgccaggtatatctggtccgatagga
caaactcaaatgaacggagcgataggacaagcatctcggggggaagatttcccagcgtta
ggtggtgcaacaggggcgctggggcctgtgggcagtggaggagaagtaaaggatagggtc
tgttttcgtccaatgaatgtcacaccttcttctccttctcactccatggtcaacggtggt
aatggacacgcggaatcaatagcaccctccaatcccccaccgagggctgcaaacctaccc
gtgtctgccagtgaaccattatggcctcggaaaccatcaagaccacaagaaccaatagtt
cgacctgtccaacaagtgtttcaaagtcccgtcgataattgggacttgaagtctatgttg
atgaacatacgagcgtattcgggtcatggagataagggagatttgatgtttggagtagat
ctcggcgatctgggtataaatgtcgagtcaaccgaaccattatatcccaatttcgtaact
ccatggacagatccaagagacagaaccgaacctttccgagtagaagaatcatggcataca
ccagcctgctaccatgtcaccgccaaacccatcgaaaccaaactcggagaagtggccgac
gaaaccctcttctacatcttctattcccaaccgcaagacgtcgtccaacttcaagtcgca
ttcgaactttatcacaatcgtggttggcgatatcacatggaattacgattatggttcacc
tccgaacaactcgccgcagttgatcttcgttcattggacaagagtcattcaaatcccatc
caaggtcctttcacccttcacgatccgaacactttacgaaccacctcgacggatgagagt
tgggtcatcgatgctaacttgctcgagatcacacgtcctgcagcggtggccatcgaagag
agcttgaagagggaagcggcgcggagtcccaacgggagcgtcacaagtggatcggggagt
ctaatgagcagtgtgatgggtgcgggatacggacaaatgcaggtcacgcgatag
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