Tremella mesenterica: TREMEDRAFT_37000
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Entry
TREMEDRAFT_37000 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
tms
Tremella mesenterica
Pathway
tms00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TREMEDRAFT_37000
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tms01007
]
TREMEDRAFT_37000
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_37000
Enzymes [BR:
tms01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
TREMEDRAFT_37000
Amino acid related enzymes [BR:
tms01007
]
Aminoacyl-tRNA synthetase
Class II (U)
TREMEDRAFT_37000
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TREMEDRAFT_37000
Prokaryotic type
TREMEDRAFT_37000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
DUF3531
Motif
Other DBs
NCBI-GeneID:
18492835
NCBI-ProteinID:
XP_007000862
JGI:
Treme1_37000
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MPTITVDKAELMRRLERDYTTHEFDELCFEFGIELDEDTTEDVKAALAKGLPTSPPQLKI
EIPANRYDLLCLEGLSRALRIFLQKDTAPTYSLSQVAQLQEVFVEASTSPLRPHFASAVL
RLARPMNDLEYDSFIDLQDKLHQNLCRMRRFVAIGTHDLDTIEGPFRYMCRDPHEIKFAP
LNKDTVHTAAELMTIYETDRHLKPYLPIIRDAPAYPIIYDKHDRVLSMPPIINSQHSKIV
SGKTKNIFIDTTATDKTKLDIVINMVATMFAEYCQIPFSIEPVKIHMPDGTSHLTPSVAP
RLTTASTKYINAATGLFLPPDEICTLLTRMSLAAVPGKPTADDVHLEVQIPCTRPDILHE
CDIMEDAAIAFGFNNLPRQLPQTNTVAQPFAVNRLADIVRKECAMAGWIEALPLILCSHD
ENFAWLRRKDPGGQAIVLANPASMEYQVVRTSLLPGMLKTIRENRALPLPVKVFEVSDIA
MQDLTAERQARNYRRLCAVYMDRKAGFEVAHGLLDRIMQILGVPFLHSESNEGEYGYYIK
GQDDDTYLPGRGATVFYRPKPNVNVKHSDSSAQTAVEKGEGALEKMAGALKAALPGASRD
VVLGSLGILHPEVLGHFELSRPCSALEIDIEPLL
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccatcacagtagataaagcggagctcatgcgacgtcttgaaagagattacaca
acacatgaattcgatgagctctgctttgagttcggtatagagctagatgaagatacgaca
gaagacgtcaaagcggctctcgcaaaaggcctccccacctctccgcctcaactcaagatt
gaaataccagccaacagatacgacctgctctgtcttgaaggtctttccagagcacttcgt
atcttcttacaaaaggacactgcacctacttattctctctcacaagtagctcagctacaa
gaggtcttcgtggaagcttcaacatctccccttcggccacactttgcgagtgcagtgctt
cgtttggctaggccaatgaacgaccttgaatatgattctttcatcgacttgcaagacaag
cttcatcaaaatttatgtcgtatgagacgttttgttgctattggtacacacgatttggat
acgattgaggggccattccggtatatgtgtcgagatcctcatgagatcaaatttgctcct
ttaaataaagacacggtccatacagctgcagagctcatgacgatctacgagaccgacaga
catttgaagccctaccttcctatcataagagatgccccggcctatcctatcatttatgac
aagcatgaccgagtgttatcaatgccacctatcattaattctcaacactccaagatcgtg
tcgggtaagacgaagaatatctttatcgacacaactgccacggacaaaacaaaattggat
atcgtcatcaatatggtcgctacgatgtttgctgagtactgtcaaatccccttctccatc
gagccagtgaagatacatatgcctgatggaacgtcccatctcacaccctccgtcgcccct
cgtctcaccacggcctccacgaaatatattaacgccgccactggtctattccttcctcca
gacgagatatgtactctccttacccgcatgtcgctagctgccgtacccgggaaacccacc
gcggacgatgtacatctagaagtacaaataccctgcacgagaccagatattcttcacgaa
tgtgatataatggaagacgccgctatagccttcggtttcaacaacttaccaaggcagctg
cctcagaccaatacggtagctcagccgttcgcggtgaaccgactagcggacattgtcagg
aaagagtgtgcaatggcaggttggatagaggcattacctcttattctgtgctctcatgat
gagaatttcgcctggctacgacggaaagacccaggtggccaggcaatcgtcttagccaac
ccagcttctatggagtatcaagtcgtccgtacatctttactacccggtatgctcaagacc
atccgagaaaatcgtgcgcttcctcttcctgtcaaagtgttcgaagtatccgatatcgcc
atgcaagaccttactgccgagcgacaggccagaaactatcgacgtctatgtgcggtttac
atggatcgtaaagctggtttcgaagtggctcatggactgttggataggatcatgcagatc
ctcggagtaccgttcctccattcagagtctaacgagggagagtatgggtattatatcaag
ggacaagatgacgatacgtatcttccaggaagaggtgccaccgtgttctatcgtccgaaa
cccaatgtcaatgtgaaacatagcgattcgagcgctcaaacggcggtggaaaagggtgaa
ggagctttggaaaagatggctggagctttgaaggctgctttaccgggagcgagtagggat
gtcgttcttggctctttgggtatccttcatccggaagtattgggtcactttgaactgtcc
cgcccctgttcagctctggagattgacattgagccattgctgtag
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